Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01429 |
Symbol | |
ID | 5553089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1447372 |
End bp | 1449090 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906920 |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
Protein accession | YP_001444631 |
Protein GI | 156973724 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAG ATCAAGCTGT TTTAAATCGC ATTTGGTCTG AAACCATCCT GACAGAATTG AACCGCTTTG GTGTGAATCA CGTTTGTATT GCACCCGGTT CTCGCTCCAC ACCTTTAACG GTCGAGGCGG CAGATAACCC AAATTTTACC ATTCACACGC ACTTTGATGA GCGTGGCTTG GGCTTTATGG CTCTGGGACT TGCTAAAGCA AGTAAAGAAC CAGTGGCGCT GATTGTTACA TCGGGTACAG CGGTGGCGAA CTTGTTACCT GCGATTGCAG AAGCAAAACT GACGGGTGAA AAGCTGGTGG TGCTAACTGC AGACCGTCCG GTTGAACTGG TGGGTTGCGG TGCAAACCAA GCTATTAATC AGTTAGGCAT CTTCGCCGAA CATGTGTCAG ACAGTTTAAA TCTGCCGAGC CCAACACTAT CAACACCTCT AAATTGGCTA CTGACTTCTG TCGATGAGGT GATGTTTACG CAACGCCTAA GAGGCAGTGC GGTACACATT AACTGTGCGT TTCCAGAGCC TTTGTACTCC AACACAGACA AGAGTACCTA TCAGGGTTAC CTTGATACCG TTGCCGGTTG GAGAGACAGC AAAGTCACAT ATTGCCAACG CTTCAATCCA AAAACCAGCA GTGCAATACC AAGCTGTGGT GACAACAAAG GCTTGGTAGT CATCGGCAGC TTGCCTTTGA TTCAAGCGCA AGCGGCACGT ACATTTGCTG AGCAGATGGG ATGGCCAGTA CTGGCTGACC CACAAAGTGG TGTGAGCTCA GATTGGGCAC ATTTCGATTT ATGGCTGCAA AATCCAAGAA TGGCGAGTCA GCTTGATGAC TGTGATTTGA TTGTTCAGTT TGGCAGCCGA ATCATTTCTA AACGTTTTAA CCATTGGCTA GAGAAGCATG TATCACGCAA CCAGCAGGGT GGTGATACAC AATATTGGTT TGTCTCTCCT CGGTTAGACC GTGACAACCA GAGCCATTTA CCTCAATGGC ACTGGGCTGA GCAACCTAGC GCTTGGGTAG AACGCACGTC GGGTTTCTCA TCAGAACACG CTGGCTGGGC AGATAAGTTG GCAGCGGACA TCAAGCAGGT CACGCAGCAT GCCAAAGGGC TGTTTATTTC GGATCCTAAG AGTGAGTTAA GTGAAATTGC ATTGGCGATT GATGTTGCCG AGCGCGCTCA GGGTGTGGAT CTGTTTGTCG GCAATAGTTT GTTTGTTCGT TTAATCGACA TGTTCGGTAA GCTTGATAAC ACAGAGGTTT TCACTAACCG TGGAGCGTCT GGCATTGATG GCCTGTTTGC TACTGCAAGT GGTGTACAAC GCGCGCGGAA TAATCCGATG TTGATGTTTA TTGGCGACAC TTCTGCGTTA TATGGCTTGA ACTCGTTGGC ACTGTTTACG CACAGTGAGC TCCCTTCGGT CTTGGTGATC GCCAATAATG ATGGCGGTGC GATTTTTGAT TTGTTGCCAG TGCCGCAGGA ACATCGTGAG TCGTTCTACC AAATGCCTCA TGGTTACGAG TTTGAGCACG CTGCGAAACA GTTCGGTTTG CAGTATCGGA AGCCAAGCTC GTTAGCGGAA TACCAATCCT TGGTTTCCGA ACATTTTGCT TCAGGGCAGG GCGCATTGGT GGTCGAAGTG CAAACGCCAT CGAACCAAGC TGTCGAGCAT TTAAAATCCT TCGATAAGAA TTTGCATGCT CTATTCTGA
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Protein sequence | MSVDQAVLNR IWSETILTEL NRFGVNHVCI APGSRSTPLT VEAADNPNFT IHTHFDERGL GFMALGLAKA SKEPVALIVT SGTAVANLLP AIAEAKLTGE KLVVLTADRP VELVGCGANQ AINQLGIFAE HVSDSLNLPS PTLSTPLNWL LTSVDEVMFT QRLRGSAVHI NCAFPEPLYS NTDKSTYQGY LDTVAGWRDS KVTYCQRFNP KTSSAIPSCG DNKGLVVIGS LPLIQAQAAR TFAEQMGWPV LADPQSGVSS DWAHFDLWLQ NPRMASQLDD CDLIVQFGSR IISKRFNHWL EKHVSRNQQG GDTQYWFVSP RLDRDNQSHL PQWHWAEQPS AWVERTSGFS SEHAGWADKL AADIKQVTQH AKGLFISDPK SELSEIALAI DVAERAQGVD LFVGNSLFVR LIDMFGKLDN TEVFTNRGAS GIDGLFATAS GVQRARNNPM LMFIGDTSAL YGLNSLALFT HSELPSVLVI ANNDGGAIFD LLPVPQEHRE SFYQMPHGYE FEHAAKQFGL QYRKPSSLAE YQSLVSEHFA SGQGALVVEV QTPSNQAVEH LKSFDKNLHA LF
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