| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01417 |
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| Symbol | clpP |
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| ID | 5553005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1433861 |
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| End bp | 1434487 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640906908 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001444619 |
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| Protein GI | 156973712 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTACC AAGAAAAAAA CGCAATGTCG CCAATTATTG ACGCGCTAGT GCCAATGGTG
GTTGAACAAA CTTCCCGCGG CGAACGCTCT TACGACATTT ACTCACGCCT ACTTAAAGAG
CGCGTGATCT TTTTAACTGG TCAAGTGGAA GACCACATGG CAAACCTTGT CGTGGCTCAA
CTACTTTTCC TAGAATCTGA AAATCCAGAT AAAGATATTT TCCTATACAT CAACTCACCA
GGTGGCAGTG TAACAGCAGG TATGTCTATC TACGACACCA TGCAATTCAT CAAGCCAAAT
GTAAGCACAG TATGTATGGG TCAAGCTTGC TCTATGGGTG CGTTCCTGCT TGCAGGTGGT
GCGCCAGGTA AGCGTTACGT TCTGCCTAAT TCACGTGTGA TGATCCACCA ACCACTAGGT
GGCTTCCAAG GTCAAGCTTC TGATATTCAA ATTCATGCTC AGGAAATCCT GACCATCAAG
CAGAAGCTAA ATAACCTATT AGCAGAACAT ACTGGCCAGC CTCTTGAAGT GATTGAGCGC
GATACCGATC GCGACAACTT CATGTCGGCA GATCAGGCAG TAGAATACGG TATTGTGGAT
GCAGTGTTGA GCCACCGCGG CGAGTAA
|
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| Protein sequence | MSYQEKNAMS PIIDALVPMV VEQTSRGERS YDIYSRLLKE RVIFLTGQVE DHMANLVVAQ
LLFLESENPD KDIFLYINSP GGSVTAGMSI YDTMQFIKPN VSTVCMGQAC SMGAFLLAGG
APGKRYVLPN SRVMIHQPLG GFQGQASDIQ IHAQEILTIK QKLNNLLAEH TGQPLEVIER
DTDRDNFMSA DQAVEYGIVD AVLSHRGE
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