Gene VIBHAR_01316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01316 
Symbol 
ID5554232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1325024 
End bp1325485 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID640906808 
Producthypothetical protein 
Protein accessionYP_001444520 
Protein GI156973613 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAT TTAGCCTATT AGAAGGTGTC ACCTTTTGGC ATTGGATTGC GTTTGGTCTC 
GCGTTACTCG CAGTTGAATT GCTCGGGACA GCCGGCTACT TTTTATGGCT CGGCCTCTCT 
GCACTAATTG TGGGTGCTAT CCTGTCTTTC TTACCGATTA GTTGGCAAAT GCAATGGTTA 
GCATTTGCTG CTTTCAGCCT AGTGACAACT TGGCTTTGGT GGCGAAAACA ATGGTCGAAG 
GATCGCAAAA GCGATAAAGC TCGCGACCTC AATCAAAAGC ATAAACAATT GATCGGCAAT 
ATTGTCACTT TGAAAGAAGA CTTCACTGTA GGCATGAACC GCTTAAGAGT TGCCGATACG 
ACTTGGTCTG CCGAATCAGA GCACGACTTA CCGGCAGGAA CTCGAGTCGA GATTGTGGCT 
GTAGAGGGCA TCATTCTCAA GATTAAGCCG GTTTCTCGCT GA
 
Protein sequence
MDLFSLLEGV TFWHWIAFGL ALLAVELLGT AGYFLWLGLS ALIVGAILSF LPISWQMQWL 
AFAAFSLVTT WLWWRKQWSK DRKSDKARDL NQKHKQLIGN IVTLKEDFTV GMNRLRVADT 
TWSAESEHDL PAGTRVEIVA VEGIILKIKP VSR