Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01296 |
Symbol | |
ID | 5553296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1301486 |
End bp | 1302778 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906788 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001444500 |
Protein GI | 156973593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAA TCTGCTCCTC AACCAACCTG AATCAAGCTT TACGAAGAGT GAAGAAGAAC AAGGGATGTG CAGGTGTCGA CAAACTCGAC ATAGATGCAA CTATCTTTAA GCTTCGACAA GCTTCAAACG GGCAAGCGCT TCGCCAGAGT CTTCTGGATG GAAGCTACCG ACCTCAACCC GTTCTTGGTG TGGGAATCCC CAAACCGAGT GGTGGCGTCA GACAACTAGG TATCCCAACA GTGCTCGATA GAATTGTCCA ACAGGCAATC ACCTCAGTAC TGTCAGATAT CTATGAAGCT AAGTTCTCCA ATAGCAGTTA CGGATTTAGA CCCAGCCGCA GTGCACATCA TGCGCTAGCG GCAGCCAGTC GCTACATCCG AGAGGGGCGA GGTTATGTAG TAGATATCGA CCTAGCGAAA TACTTCGATA CCGTTAATCA CGATAGACTG ATGCACAGAC TGTCAGAGGA TATCGCGGAT AAACGAGTAT TGAAGCTCAT CAGGTCATAT CTACAGGCAG GCATAATGCG AAACGGTTTA GTCGAACAGA GACAACGAGG GACACCACAG GGTGGTCCAT TATCTCCGTT GCTATCCAAT ATCGTATTAG ATGAACTGGA TAAAGAGCTA GAGCGTAGAG GGCATAAGTT CTGTCGATAT GCAGACGACT GTCAAATCTA TGTTGGTAGT GAGGAAGCCG CTTATCGAGT GAAAGAGTCG ATAACGGAGT ACTTGGAGCA AAAACTGAAA CTCACGGTAA ACCGAGAGAA AAGTGCAGCA ACAAGAGTGA CAGAGCGAAC TTACCTAAGC CACCGCTTCG GGATAGATGG GACAATCCAT ATATCGAAGC CAGCGCAAAC TCAAATGAAG ACGCGAGTGC GGCAGATAAC GAAGCGAAAC CGAGGTCGAG AGTTAAAGGT GGTAATCGCC GAGTTAACTC AATACCTAAG AGGTTGGCAA GACTACTTCA AACTCGCCAT ACGGAAGAGC AGCATGAAGC GCTTGGACGA ATGGATACGG CGACGGCTAA GATGCTATCG ACTTAAGCAA CGCAAACACA GATACGGCAT AGCGACATGT TTACAGCGAC AAGGTGTAAC AGAGCGTAAT GCGTGGAAGT TAGCGATGTC AGATAAAGGT TGGTGGCGGC TAGCATTAAC GCCCCAGACA AATCACGCTA TGCCAACAAA ATGGTTCGAG GAGTTGGGTC TGTACTCGTT GCGAGATGGG TATGAGTCAC TAAAAGTATA TTCGGAACCG CCGTATGCGA CCCACGCTTG TACGGTGGTG TGA
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Protein sequence | MEQICSSTNL NQALRRVKKN KGCAGVDKLD IDATIFKLRQ ASNGQALRQS LLDGSYRPQP VLGVGIPKPS GGVRQLGIPT VLDRIVQQAI TSVLSDIYEA KFSNSSYGFR PSRSAHHALA AASRYIREGR GYVVDIDLAK YFDTVNHDRL MHRLSEDIAD KRVLKLIRSY LQAGIMRNGL VEQRQRGTPQ GGPLSPLLSN IVLDELDKEL ERRGHKFCRY ADDCQIYVGS EEAAYRVKES ITEYLEQKLK LTVNREKSAA TRVTERTYLS HRFGIDGTIH ISKPAQTQMK TRVRQITKRN RGRELKVVIA ELTQYLRGWQ DYFKLAIRKS SMKRLDEWIR RRLRCYRLKQ RKHRYGIATC LQRQGVTERN AWKLAMSDKG WWRLALTPQT NHAMPTKWFE ELGLYSLRDG YESLKVYSEP PYATHACTVV
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