Gene VIBHAR_01282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01282 
Symbol 
ID5552998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1291075 
End bp1292001 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content46% 
IMG OID640906774 
Producthypothetical protein 
Protein accessionYP_001444486 
Protein GI156973579 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGGA TTCTTGATTC GGTGAATCAG CGTACGCAAC TCGTCGGCCA AAACCGATTG 
GAACTACTGA CTTTTCGGTT GATGGGACGA CAGCGCTACG GCATTAACGT ATTCAAAGTA
AAAGAAGTAC TACAGTGCCC TAAGCTGACT TCGATGCCAA ATCTACATCC ACTAGTGAAA
GGTGTCGCTC ATATCCGTGG CCATACTGTG TCAGTGATTG ATTTAAGTCT GGCAATCGGT
GGCCGTCCAA CCACAGATAT TGATAAATGT TTTGTTGTGA TTGCTGAATT CAACCGTACT
ATCCAAGCGT TTTTGGTGTC TTCGGTTGAG CGCATTATTA ACATGCATTG GGAAGCGATT
TTGCCGCCGC CAGATGGTGC AGGTAAAGCG CACTACCTAA CAGCGGTAAC AAACATCGAC
AACGAGCTAG TAGAAATTCT GGACGTTGAG AAAATCTTGG CAGAGATTGC ACCAGTAGAC
GAAACCATGG ATTCAAGCAT CGGCGAAGAG ATTGCAGTTG CTGAACAAGA GAAGCCAATC
GTGCGCCGCG TATTGATCGC GGATGACTCG ACGGTAGCGC GTAAACAGGT GGAGCGTGCA
ATTACTTCAA TCGGTTTTGA AGTTGTCTCT GTGAAAGATG GTAAAGAAGC GTACAATAAG
CTGCTTGAAA TGGCACAAGA AGGTAGCATC TACGATCAGA TCTCTTTGGT CATTTCAGAT
ATCGAAATGC CAGAGATGGA TGGCTACACA CTAACGGCCG AAATTCGCCG AAATGCAGAT
TTGAAGAACC TTTATGTTAT CCTGCACTCC TCATTGAGTG GCGTCTTCAA CCAAGCCATG
GTTGAGCGCG TAGGTGCTAA CACCTTCATT GCGAAATTTA ACCCAGATGA ATTGGGTAAC
GCGGTTAAAT CTGCATTAAC ACAATAA
 
Protein sequence
MTGILDSVNQ RTQLVGQNRL ELLTFRLMGR QRYGINVFKV KEVLQCPKLT SMPNLHPLVK 
GVAHIRGHTV SVIDLSLAIG GRPTTDIDKC FVVIAEFNRT IQAFLVSSVE RIINMHWEAI
LPPPDGAGKA HYLTAVTNID NELVEILDVE KILAEIAPVD ETMDSSIGEE IAVAEQEKPI
VRRVLIADDS TVARKQVERA ITSIGFEVVS VKDGKEAYNK LLEMAQEGSI YDQISLVISD
IEMPEMDGYT LTAEIRRNAD LKNLYVILHS SLSGVFNQAM VERVGANTFI AKFNPDELGN
AVKSALTQ