Gene VIBHAR_01218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01218 
Symbol 
ID5555070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1238268 
End bp1238738 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID640906710 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001444434 
Protein GI156973527 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATTC AACTAATTGC CGTCGGCACA AAAATGCCAA AATGGGTCGA AGAAGGTTTT 
CAAGAATACC GTCGCCGTTT CCCACATGAT ATGCCACTTG AGTTGGTTGA AATCCCTGCG 
GGTAAACGCG GCAAAAATGC AGACATCGCG CGTATCTTGC AAAAAGAAGG CGAAGCGATG 
TTGTCAGCCG TACCTAAAGG TGCTCGTATC GTCACACTCG ATATCCCAGG CAAAAAGTGG 
GATACCCCGC AACTGGCCGA ACAGCTAGAA GCGTGGAAGC TCGATGGTCG TGATGTGTCG 
ATTCTGATCG GCGGCCCTGA AGGTTTAGCG CCAGCTTGTA AAGCCGCAGC AGACCAAAGC 
TGGTCACTGT CTGCATTGAC ACTGCCGCAC CCACTTGTGC GCATCGTGAT GGCAGAGAGC 
TTATACCGAG CGTGGAGCAT TACTGCTAAC CACCCTTACC ACCGCGAATA A
 
Protein sequence
MKIQLIAVGT KMPKWVEEGF QEYRRRFPHD MPLELVEIPA GKRGKNADIA RILQKEGEAM 
LSAVPKGARI VTLDIPGKKW DTPQLAEQLE AWKLDGRDVS ILIGGPEGLA PACKAAADQS 
WSLSALTLPH PLVRIVMAES LYRAWSITAN HPYHRE