Gene VIBHAR_01214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01214 
Symbol 
ID5556301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1233114 
End bp1234292 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID640906706 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_001444430 
Protein GI156973523 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATAAGTTTGT GAAATCTATT CTCGTTTCTA CGGTTGCACT ATCTGCAACC 
ATCGCTCAAT CTGCTTTTGC TTCACCAGTT GTTGTCCCAG ATGCACCTCA AATCGCTGCC
AAAGGCTACG TTTTGATGGA TTACAACTCA GGTAAAGTTC TGGCTGAGAA AGAGATGAAC
ACAAAGTTGT CTCCTGCTAG TCTGACAAAG ATGATGACCA GCTACGTAAT TGGCCAAGAG
CTAGCGCGTG GTAATATTTC AGAAGACGAT GATGTGACCA TCAGTAAGAA TGCTTGGGCG
AAAAACTTCC CTGATTCTTC AAAAATGTTC ATCGAAGTCG GTACAACGGT TAAGGTTCAT
GACCTAAACC GCGGCATCAT CATTCAATCA GGTAACGATG CTTGTGTGGC AATGGCTGAG
CACATTGCTG GCTCTGAAGA CGCATTCGTT GATTTAATGA ACGCATGGGC AAACACACTG
GGCATGAAGA ACACGCATTT CGCGAACGTT CACGGCCTAG ACAACCCGAA CCTATACTCA
ACGCCTTACG ATATGGCACT ACTTGGTAAA GCACTGATCC GTGACGTGCC AGACGAGTAC
CGTATCTACT CTGATAAGAA ATTTACTTAC AACGGCATCA CTCAGTACAA CCGTAACGGT
CTACTGTGGG ACAAGAGCAT GAACGTTGAC GGTATCAAAA CTGGTCACAC GAGCAATGCA
GGTTACAGCC TAGTAAGTTC TGCAACAGAA GGTCAGATGC GTCTGGTTGC TGTTGTAATG
GGTACAAAAG ATGCAAACGC ACGTAAGTCA GAGAGCAAAA AGCTACTGAG CTACGGTTTC
CGCTTCTTCG AAACAGTGGC ACCACACAAA GCCGGTGAAA CTTTCGTTGA AGAAAAAGTA
TGGATGGGTA ACAAAGACAC TGTAGCACTG GGTCTTGACC AAGATACTTA CGTGACACTG
CCTCGCGGTG AAGCAAAGAA CCTAAAAGCA AGCTTCGTAC TTGAAAAAGA GCTAGAAGCC
CCAATTAAGA AAGGTGATGT AGTTGGTAAG CTATACTATC AAATTGATGG TGAAGATATT
GCTGAGTACC CACTAATGGC ACTGGAAACA GTGGACCAAG GCAGCCTATT TAGCCGCATG
TGGGACTACA TCGTATTGTT GTTTAAGAGC TTCTTCTAA
 
Protein sequence
MNKNKFVKSI LVSTVALSAT IAQSAFASPV VVPDAPQIAA KGYVLMDYNS GKVLAEKEMN 
TKLSPASLTK MMTSYVIGQE LARGNISEDD DVTISKNAWA KNFPDSSKMF IEVGTTVKVH
DLNRGIIIQS GNDACVAMAE HIAGSEDAFV DLMNAWANTL GMKNTHFANV HGLDNPNLYS
TPYDMALLGK ALIRDVPDEY RIYSDKKFTY NGITQYNRNG LLWDKSMNVD GIKTGHTSNA
GYSLVSSATE GQMRLVAVVM GTKDANARKS ESKKLLSYGF RFFETVAPHK AGETFVEEKV
WMGNKDTVAL GLDQDTYVTL PRGEAKNLKA SFVLEKELEA PIKKGDVVGK LYYQIDGEDI
AEYPLMALET VDQGSLFSRM WDYIVLLFKS FF