Gene VIBHAR_01106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01106 
Symbol 
ID5556437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1115944 
End bp1117986 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content48% 
IMG OID640906598 
Producthypothetical protein 
Protein accessionYP_001444324 
Protein GI156973417 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAT CTCCTGCCTT TCTGCGTAAA ATCTGGTACT CCCCTTCTGT CAATCTTGGT 
CTGCGTGCCA CCAGCGCGAT TGTTCTGTTC ATGGGGTTGG GTGTGCTATT CAACCAAATC
AATCTCGCCA TGACGGCTTT AATGACCATG CCTGCAGCCT TGATCAGCGG TTTAGACACT
GCAGGTCCTA GACGCTGGAC ACGCTTTGCA ATTACCGCTT TCACGTGGAG CATTACGCTT
GTCATCAGTT ATGCTCTGCT GAATATGGGC TTACCGCTGT GGCTGACTTA CGGCGCGATG
GGAGCAATAT TGGCGAGTGC AGCAGTGAAT GGTCCGTTTT GGGGCCGTCT TGGCATGTCT
AGCTTACTGA TCGCGGTCGT GAGCTTGTCG CTACATAACT CCAGCGCAGT ACTTAGTCTC
TATCCGATGC TGGTGCTGGG GCCACTCACT TTTGCGCTGT TCAGTTGGCT TTGGTTTGCC
TTATGGAAAC ATTACGCGCT GCGTGTTTGT CTTTCAGCGA TTTACGAGAC GCTGGCGGAC
TATATTCAAT ATCGCCAAGC TTTTTTACTT GGAAGCGAAA ACGATGCCCC GAAACGACGC
ATCAAATATC AGTTGATTGA ACTGTTTCAG CAAGCCCTAC AATCAGAATC TTTTCGCTCT
AAACATGAAG ATGCCAACTC TCTACGTCAG GCTTTGTTTT TGGCGCTCGA TACATTTGAA
GTCGTCTTGA GCAGCCATAC TAGCAACCCT GATCTACTCA AGCAATTTCA ATCCAGCAAA
TCGAAACGAG ATCTGCTCTT GGTTTGGAGC CAACACTGTC AGCAAAGATT AAGACACAAA
GCCAAGCAGC TTTTGCATAA CACGCATGAA GAGATGGAAC ACTTAAGCTC ACTGGAGCAG
GAAGCCCATG ATTTGATTGA GGCAGTGAAG CTAGAAGACC AACCTCGCTT TCGCTACTGG
GCATACGCGG TCAAGCATAT TTCTCGTCGT ATTGAGCTCA ATGAACCTGC TTATGAACGC
TCCTTTGAGG TGCAACCATT CGAGCTGTCT TTTCGTTTAC CAAGTCGAGG CAACCCGATT
TGGCGCCACG TGACTCGCGT TGGTTTGATG TTTGCTCTTG GCGCTGGGAT TGCTGAATAC
TTTGAATTGA TTCGCCCGGA TTGGGTGTTG ATTTCCATGT TGATGGTGAT CCAGCCGAGC
TTCTTAGCAA CCCGAAGTAA AACTTGGCAA CGCTGTTTAG GTACGGCGCT TGGGGTATTG
TTCGCCACCT CATTGATTCA GCTAGGCGTA CCACCGACCA TCCTGTTTGT GTTGATCGCA
GTTCTATTAC CTGTCGCAAT GCTCAATATT ATGCGCCATT ACTCGCTGGC GATTGGCTGT
ATTACCGCAC TGTTGATTTT GGTTTATCAG ACCATGGCAC ACCAAGGGCT CGACTTTGCC
GCACCTCGCC TGATAGACAA TGTCGTCGGT GGCGCAATTG TCTTGCTCGG TTATGGCTTA
TTGTGGCCGC AGTGGCGAGG TAAAGAGATT TATACCCAAG CATTAAAAGC ACTCGATAGT
TCAAAAAGCT TATTTGTGTA TTGCTATGAG CAGTTACAAG TCGACACAGA GCAACGTGAT
CACATGGCGC TCACTAAGCA ACGTGCCGCT ATGCTCACCG CTGAAAGCGA CCTTGAACTG
ATTTACAACG AGATGCAACA AGAGCCAAGG CACACTCGTG CCGATCCGCA TTATTATGAA
GATATGCTGA GCCATTATCG CTTGTTGAGT CACTACCTTT GCTTGCTGCT CCCTCTAGTG
AGAACGGGGG CTCATTACCA AGGCTCACCG CAAGTTGAAC GCCTTATTCA TGATGCGATG
GATGCGTTGA TCAGTACGAT TCGTGACAAT CGCGTACATG AACTGCCAGC GCTGAGCAAT
AAAACCGGTG CCGATCATCC CTCTTCAACG GCTGGTCAAC GATCTGTCGA AGAGATCATC
TGGTTGGCAT TGATGACGAT TAAACAAATG CACGACTTAG TAAGGCGTAA CCTAAAAGAC
TAA
 
Protein sequence
MTLSPAFLRK IWYSPSVNLG LRATSAIVLF MGLGVLFNQI NLAMTALMTM PAALISGLDT 
AGPRRWTRFA ITAFTWSITL VISYALLNMG LPLWLTYGAM GAILASAAVN GPFWGRLGMS
SLLIAVVSLS LHNSSAVLSL YPMLVLGPLT FALFSWLWFA LWKHYALRVC LSAIYETLAD
YIQYRQAFLL GSENDAPKRR IKYQLIELFQ QALQSESFRS KHEDANSLRQ ALFLALDTFE
VVLSSHTSNP DLLKQFQSSK SKRDLLLVWS QHCQQRLRHK AKQLLHNTHE EMEHLSSLEQ
EAHDLIEAVK LEDQPRFRYW AYAVKHISRR IELNEPAYER SFEVQPFELS FRLPSRGNPI
WRHVTRVGLM FALGAGIAEY FELIRPDWVL ISMLMVIQPS FLATRSKTWQ RCLGTALGVL
FATSLIQLGV PPTILFVLIA VLLPVAMLNI MRHYSLAIGC ITALLILVYQ TMAHQGLDFA
APRLIDNVVG GAIVLLGYGL LWPQWRGKEI YTQALKALDS SKSLFVYCYE QLQVDTEQRD
HMALTKQRAA MLTAESDLEL IYNEMQQEPR HTRADPHYYE DMLSHYRLLS HYLCLLLPLV
RTGAHYQGSP QVERLIHDAM DALISTIRDN RVHELPALSN KTGADHPSST AGQRSVEEII
WLALMTIKQM HDLVRRNLKD