Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01106 |
Symbol | |
ID | 5556437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1115944 |
End bp | 1117986 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906598 |
Product | hypothetical protein |
Protein accession | YP_001444324 |
Protein GI | 156973417 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAT CTCCTGCCTT TCTGCGTAAA ATCTGGTACT CCCCTTCTGT CAATCTTGGT CTGCGTGCCA CCAGCGCGAT TGTTCTGTTC ATGGGGTTGG GTGTGCTATT CAACCAAATC AATCTCGCCA TGACGGCTTT AATGACCATG CCTGCAGCCT TGATCAGCGG TTTAGACACT GCAGGTCCTA GACGCTGGAC ACGCTTTGCA ATTACCGCTT TCACGTGGAG CATTACGCTT GTCATCAGTT ATGCTCTGCT GAATATGGGC TTACCGCTGT GGCTGACTTA CGGCGCGATG GGAGCAATAT TGGCGAGTGC AGCAGTGAAT GGTCCGTTTT GGGGCCGTCT TGGCATGTCT AGCTTACTGA TCGCGGTCGT GAGCTTGTCG CTACATAACT CCAGCGCAGT ACTTAGTCTC TATCCGATGC TGGTGCTGGG GCCACTCACT TTTGCGCTGT TCAGTTGGCT TTGGTTTGCC TTATGGAAAC ATTACGCGCT GCGTGTTTGT CTTTCAGCGA TTTACGAGAC GCTGGCGGAC TATATTCAAT ATCGCCAAGC TTTTTTACTT GGAAGCGAAA ACGATGCCCC GAAACGACGC ATCAAATATC AGTTGATTGA ACTGTTTCAG CAAGCCCTAC AATCAGAATC TTTTCGCTCT AAACATGAAG ATGCCAACTC TCTACGTCAG GCTTTGTTTT TGGCGCTCGA TACATTTGAA GTCGTCTTGA GCAGCCATAC TAGCAACCCT GATCTACTCA AGCAATTTCA ATCCAGCAAA TCGAAACGAG ATCTGCTCTT GGTTTGGAGC CAACACTGTC AGCAAAGATT AAGACACAAA GCCAAGCAGC TTTTGCATAA CACGCATGAA GAGATGGAAC ACTTAAGCTC ACTGGAGCAG GAAGCCCATG ATTTGATTGA GGCAGTGAAG CTAGAAGACC AACCTCGCTT TCGCTACTGG GCATACGCGG TCAAGCATAT TTCTCGTCGT ATTGAGCTCA ATGAACCTGC TTATGAACGC TCCTTTGAGG TGCAACCATT CGAGCTGTCT TTTCGTTTAC CAAGTCGAGG CAACCCGATT TGGCGCCACG TGACTCGCGT TGGTTTGATG TTTGCTCTTG GCGCTGGGAT TGCTGAATAC TTTGAATTGA TTCGCCCGGA TTGGGTGTTG ATTTCCATGT TGATGGTGAT CCAGCCGAGC TTCTTAGCAA CCCGAAGTAA AACTTGGCAA CGCTGTTTAG GTACGGCGCT TGGGGTATTG TTCGCCACCT CATTGATTCA GCTAGGCGTA CCACCGACCA TCCTGTTTGT GTTGATCGCA GTTCTATTAC CTGTCGCAAT GCTCAATATT ATGCGCCATT ACTCGCTGGC GATTGGCTGT ATTACCGCAC TGTTGATTTT GGTTTATCAG ACCATGGCAC ACCAAGGGCT CGACTTTGCC GCACCTCGCC TGATAGACAA TGTCGTCGGT GGCGCAATTG TCTTGCTCGG TTATGGCTTA TTGTGGCCGC AGTGGCGAGG TAAAGAGATT TATACCCAAG CATTAAAAGC ACTCGATAGT TCAAAAAGCT TATTTGTGTA TTGCTATGAG CAGTTACAAG TCGACACAGA GCAACGTGAT CACATGGCGC TCACTAAGCA ACGTGCCGCT ATGCTCACCG CTGAAAGCGA CCTTGAACTG ATTTACAACG AGATGCAACA AGAGCCAAGG CACACTCGTG CCGATCCGCA TTATTATGAA GATATGCTGA GCCATTATCG CTTGTTGAGT CACTACCTTT GCTTGCTGCT CCCTCTAGTG AGAACGGGGG CTCATTACCA AGGCTCACCG CAAGTTGAAC GCCTTATTCA TGATGCGATG GATGCGTTGA TCAGTACGAT TCGTGACAAT CGCGTACATG AACTGCCAGC GCTGAGCAAT AAAACCGGTG CCGATCATCC CTCTTCAACG GCTGGTCAAC GATCTGTCGA AGAGATCATC TGGTTGGCAT TGATGACGAT TAAACAAATG CACGACTTAG TAAGGCGTAA CCTAAAAGAC TAA
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Protein sequence | MTLSPAFLRK IWYSPSVNLG LRATSAIVLF MGLGVLFNQI NLAMTALMTM PAALISGLDT AGPRRWTRFA ITAFTWSITL VISYALLNMG LPLWLTYGAM GAILASAAVN GPFWGRLGMS SLLIAVVSLS LHNSSAVLSL YPMLVLGPLT FALFSWLWFA LWKHYALRVC LSAIYETLAD YIQYRQAFLL GSENDAPKRR IKYQLIELFQ QALQSESFRS KHEDANSLRQ ALFLALDTFE VVLSSHTSNP DLLKQFQSSK SKRDLLLVWS QHCQQRLRHK AKQLLHNTHE EMEHLSSLEQ EAHDLIEAVK LEDQPRFRYW AYAVKHISRR IELNEPAYER SFEVQPFELS FRLPSRGNPI WRHVTRVGLM FALGAGIAEY FELIRPDWVL ISMLMVIQPS FLATRSKTWQ RCLGTALGVL FATSLIQLGV PPTILFVLIA VLLPVAMLNI MRHYSLAIGC ITALLILVYQ TMAHQGLDFA APRLIDNVVG GAIVLLGYGL LWPQWRGKEI YTQALKALDS SKSLFVYCYE QLQVDTEQRD HMALTKQRAA MLTAESDLEL IYNEMQQEPR HTRADPHYYE DMLSHYRLLS HYLCLLLPLV RTGAHYQGSP QVERLIHDAM DALISTIRDN RVHELPALSN KTGADHPSST AGQRSVEEII WLALMTIKQM HDLVRRNLKD
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