Gene VIBHAR_01080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01080 
Symbol 
ID5554704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1090289 
End bp1090894 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content49% 
IMG OID640906574 
ProductNa+/H+ antiporter 
Protein accessionYP_001444300 
Protein GI156973393 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTTT ATGGCGTGAG AAAGCTCTCT GATGGCATTC AGGTTTACCT AAAAGGGATG 
TCGAACATGA TGTCCGTTGC GGTGATTTTG GTGCTGGCTT GGGCATTAAG CTCCGTAGGT 
AAAGAGCTTG GCGCGGCGGC TTACATTGCA GAGCAAGCAC AAGCTGGCTT CCCTTACTGG 
TTATTGCCTG CCGTGGCTTT TCTATTGGCG GGTATTATCT CTTTTGCTAC AGGGTCGTCA 
TGGGGTACTT TTGCCATCAT GATGCCATTG ATCATTCCAA CCGCTGTCGC GATTGATGCG 
CCATTGTTGG TGTGTATTGG TGCGGTGCTA TCTGGTGGTT TATTTGGTGA CCATTGTTCA 
CCAATTTCGG AAACTACCAT TTTGTCTTCG ACTGGTGCGG GTTGTGAGCA GTATGAGCAC 
TTTAGAACCC AGTTGCCTTA TGCGGTACTC AACGGCGCTA TCGCCCTGAC AAGCTTCCTT 
GTTGCGGGGG TTATGGTTTC TCCTTTGATT GTGCTGGTGG CAATAGTGGC GCAGTTTGCC 
ATTTATTTGG TGTTCTCTAA GCAGCAATCT TCACCCATGT CAGAGCAAGT AATAGCAGAG 
CAATAG
 
Protein sequence
MAFYGVRKLS DGIQVYLKGM SNMMSVAVIL VLAWALSSVG KELGAAAYIA EQAQAGFPYW 
LLPAVAFLLA GIISFATGSS WGTFAIMMPL IIPTAVAIDA PLLVCIGAVL SGGLFGDHCS 
PISETTILSS TGAGCEQYEH FRTQLPYAVL NGAIALTSFL VAGVMVSPLI VLVAIVAQFA 
IYLVFSKQQS SPMSEQVIAE Q