Gene VIBHAR_01078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01078 
Symbol 
ID5556201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1087936 
End bp1088892 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID640906572 
ProductNa+/H+ antiporter 
Protein accessionYP_001444298 
Protein GI156973391 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGG CAGAAGTTAC CTCCCTTATC CCCATTATTA TTACGTTAGT CCTTGCGCTA 
ACCACAAGAA ACGTTGTCGT CGGTCTTTTT GCCGGTGTCG TCAGTGGTGT GGCTATGCTT
GAAGGTACAT TCGTCGACAA AGGTCCGCTC GATTCGTTTA GCGCGCTGAT GAAAAGTTAC
CTGTTGCCGC AACTGACTGA CAGTTACAAC GCGGGCGTCA TCCTTCTTTT GGTTTTCATT
GGTGGCTTTG TTGCCTTGAT GGAGAAATCT GGCGGTGGTG TGGCGTTCGC TAAAAAGGTC
ACACAATGGG TTGCCAATAA ATGCCAAGCG CAGCTCTCTG CTTGGTTTGG CGGCGTTGTT
ATTTTCTTTT CAGACCTTGG TACACCGTTA ATTGTTGGCC CTGTCTTTCG TCCTCTTTTT
GATAAACTGA AAGTCTCTCG CCAGAAGCTT GCCTTTATCA TCGATTCCAC TTCTTCACCT
GTCGCTATCC TAATTCCTTT CATCGGTTGG GGTGTTTACA TTATGGGATT GATTCAGAAA
GAGTTCGCAG CACTGGATGT GGGGATCAGT GATTGGGATG CCTTTATTGG CGCGATTCCT
TATCAGTTTT ATGCCTTTTT AGCGATCGCG ATTGTGCCGA TTGTCTCTTT CTTCAAACTG
GATTTTGGTC CGATGGCGAA AGCCGAGCAG CTTGCCGAGC AAGGTTCTGA TTTTGGAAAA
GTGCAAGATT CATTAAATGT GTTTGAGCAT AAAAATGCAA AAACAAGTTT TGTTTGGGCA
CCGCTGCTTG TCATGCTAGT TGTGCTTTGT TCAATATTGG TTCCTCACGG TTTTCCATTT
CAGAAAGTGG CAGGCTCCAC CTTCCGTGCT GCATTGTCGT CGGCGTATTT CTTTGCTGCA
ATTACCCTAA TTAGTTTGAT CAATGCCGTT CGGATAAGCA TTAATGCTTA TATCTAA
 
Protein sequence
MEQAEVTSLI PIIITLVLAL TTRNVVVGLF AGVVSGVAML EGTFVDKGPL DSFSALMKSY 
LLPQLTDSYN AGVILLLVFI GGFVALMEKS GGGVAFAKKV TQWVANKCQA QLSAWFGGVV
IFFSDLGTPL IVGPVFRPLF DKLKVSRQKL AFIIDSTSSP VAILIPFIGW GVYIMGLIQK
EFAALDVGIS DWDAFIGAIP YQFYAFLAIA IVPIVSFFKL DFGPMAKAEQ LAEQGSDFGK
VQDSLNVFEH KNAKTSFVWA PLLVMLVVLC SILVPHGFPF QKVAGSTFRA ALSSAYFFAA
ITLISLINAV RISINAYI