Gene VIBHAR_00983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00983 
SymbolispH 
ID5555665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp990593 
End bp991558 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID640906477 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_001444209 
Protein GI156973302 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG AAATGAAAAT CCTGTTAGCT AACCCACGTG GTTTCTGTGC TGGTGTTGAC 
CGCGCGATTA GCATCGTAGA GCGTGCGCTA GAGATGTATC AGCCACCAAT CTATGTTCGA 
CATGAAGTGG TACACAACCG TTTTGTGGTT GAAGGTCTAA AGCAGCGTGG TGCTATCTTC 
GTTGAAGAAT TGCACGAAGT GCCAGACGAC AACATTGTGA TTTTCTCCGC TCATGGTGTG 
TCACAAGCCG TACGCCAAGA AGCGAAGTCT CGTGATTTAA CAGTATTCGA TGCAACGTGT 
CCGCTGGTAA CCAAAGTACA TATGGAAGTA GCGCGCGCGA GCCGTCGAAA TATGGAAGTG 
GTACTGATTG GTCATGCTGG TCACCCAGAA GTGGAAGGTA CAATGGGTCA GTACTCTAGC 
GAGACGGGCG GTATGTACCT TGTGGAAACG CCAGCCGATG TTGAGAAGCT AAAATCGATC 
GTAAAAGATC CATCGGATCT GCACTACGTA AGCCAAACAA CATTGTCTGT CGATGAAACC 
GCAGACGTAA TTGAAGAGTT ACGCCGCGTA TTCCCAGAGA TTCAAGGTCC TCGTAAAGAT 
GATATCTGCT ACGCGACGCA AAACCGTCAA GATGCTGTGC GTGAGCTCTC TGCTGATGTT 
GATGTGATGG TCGTTGTAGG TTCTAAGAAC TCTTCAAACT CTACTCGCTT AAAAGAGTTA 
GCTGAGAAGC TAGGCACTCC GGGCTACTTA ACGGACTGCC CAGAAGACAT CAAGCCAGAG 
TGGTTTGAGG GTAAGGTAAA AGTCGGTGTG ACTGCGGGTG CATCTGCACC AGAAGAGTTG 
GTAAACCAAA TCCTAGATCG TATCAAAGAA CTGGTTGGTG CTGAGGCAGT AGATGAAGTG 
CTTGGTCGTG AAGAGAACAT GTTCTTCGAA GTACCAAAAG AACTGCAAAT TAAGCAAGTC 
GATTAA
 
Protein sequence
MSNEMKILLA NPRGFCAGVD RAISIVERAL EMYQPPIYVR HEVVHNRFVV EGLKQRGAIF 
VEELHEVPDD NIVIFSAHGV SQAVRQEAKS RDLTVFDATC PLVTKVHMEV ARASRRNMEV 
VLIGHAGHPE VEGTMGQYSS ETGGMYLVET PADVEKLKSI VKDPSDLHYV SQTTLSVDET 
ADVIEELRRV FPEIQGPRKD DICYATQNRQ DAVRELSADV DVMVVVGSKN SSNSTRLKEL 
AEKLGTPGYL TDCPEDIKPE WFEGKVKVGV TAGASAPEEL VNQILDRIKE LVGAEAVDEV 
LGREENMFFE VPKELQIKQV D