| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00925 |
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| Symbol | gltD |
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| ID | 5554279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 918908 |
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| End bp | 920320 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640906419 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001444151 |
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| Protein GI | 156973244 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA ACGTTTATCA ATTTATCGAT GTTCAACGCG TAGATCCTGC GAAGAAACCT
ATCAAAGTGC GTAAGATCGA ATTCGTTGAA ATCTATGAAC CATTTACCAA GCAACAAGCG
ACTGCGCAGG CGGATCGCTG CTTAGATTGT GGTAACCCAT ATTGTGAATG GAAGTGCCCA
GTCCACAACT ACATCCCACA ATGGCTAAAG TTAGCCAATG AAGGTCGTAT CCTTGAAGCT
GTTGAATTGT CACACCAAAC CAACAGCTTG CCTGAAGTTT GTGGCCGAGT ATGTCCGCAA
GATCGTCTAT GCGAGGGCTC TTGTACTCTC AATGAGGACT TTGGTGCAGT CACTATAGGT
AACGTTGAAA AATACATTAC CGACAAAGCC TTTGAAATGG GCTGGAAGCC TGACATGTCC
AAGGTGGAAT GGACTGACAA AAAGGTTGCC ATCATTGGTG CAGGCCCTGC AGGCTTGGCA
GCCGCTGATA TCCTAGTGCG CAATGGCGTG AAACCTGTCG TATTTGACCG CTATCCTGAA
ATTGGAGGCC TACTGACCTT CGGTATCCCT TCGTTCAAGC TTGAAAAAGG CGTGATGGAA
AATCGTCGTC GCGTCTTCAC CGAGATGGGC GTAGAGTTCC AGATGAATGT CGAAGTAGGT
AAAGATGTAC AGATGCAAGA GCTACTTGAT GAGTACGATG CCGTCTTTTT GGGTGTTGGT
ACTTACAAGT ACATGCGTGC GGGACTAGAA AATGAAGGTG CGCCGGGCGT TTACGATGCT
CTGCCATTCT TGATTTCAAA TACTTACAAG GTCATGGGCT TGGAGCACGA CAAACCTTTT
ATCGACATGG CAAAACAACG CGTCGTCGTA CTTGGTGGTG GTGATACCGC AATGGACTGT
GTTCGTACCT CTATCCGCCA AGGCGCGTCA AACGTGGTAT GTGCTTACCG TCGTGATGAA
GCCAATATGC CCGGCTCTCG CCGCGAGGTG AAAAACGCCA AAGAAGAAGG CGTGAAGTTT
ATGTTCAACC TCCAGCCTTT AGGAATTGAA GTCGATTCGT CAGGTAAGGT CTCGGGGGTC
AAAGTGGTGA AAACTGCCCT TGGCGAGCCT GATGAAGCGG GTCGTCGCCG TCCAGAACCC
GTCGAAGGCA GTGAGCACGT TCTACCAGCA GACGTCGTTA TCATGGCGTT TGGTTTCCAA
CCACACAAAA TGGATTGGTT AGCTCCGTTT GATGTCGAAT TGGATCAATG GGGTCGTATC
AAAGCCCCGG CGAAACAAGA GTTCCAATTC CAGACCAGCA ACAAAAAGAT CTTCGCTGGT
GGCGATGCGG TACGAGGCTC AGATCTGGTA GTAACCGCGA TTGATGAAGG TCGAAAAGCC
GCAGAAGGTA TTCTCGATTA CCTTGAAGTT TAA
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| Protein sequence | MSQNVYQFID VQRVDPAKKP IKVRKIEFVE IYEPFTKQQA TAQADRCLDC GNPYCEWKCP
VHNYIPQWLK LANEGRILEA VELSHQTNSL PEVCGRVCPQ DRLCEGSCTL NEDFGAVTIG
NVEKYITDKA FEMGWKPDMS KVEWTDKKVA IIGAGPAGLA AADILVRNGV KPVVFDRYPE
IGGLLTFGIP SFKLEKGVME NRRRVFTEMG VEFQMNVEVG KDVQMQELLD EYDAVFLGVG
TYKYMRAGLE NEGAPGVYDA LPFLISNTYK VMGLEHDKPF IDMAKQRVVV LGGGDTAMDC
VRTSIRQGAS NVVCAYRRDE ANMPGSRREV KNAKEEGVKF MFNLQPLGIE VDSSGKVSGV
KVVKTALGEP DEAGRRRPEP VEGSEHVLPA DVVIMAFGFQ PHKMDWLAPF DVELDQWGRI
KAPAKQEFQF QTSNKKIFAG GDAVRGSDLV VTAIDEGRKA AEGILDYLEV
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