Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00900 |
Symbol | murD |
ID | 5554036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 892226 |
End bp | 893539 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906394 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001444126 |
Protein GI | 156973219 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGTT GGCAAAACAT ACATAAGGTC GTCGTTGTAG GGCTCGGTAT TACCGGGCTC TCTGTCGTTA AACACCTAAC AAAAACACAG CCGCAACTGA CGGTTAAAGT CATCGATACA CGTGCGACTC CTCCGGGAAC TGAGCGCTTA CCAGAGCAAG TTGAACTGCA CAGCGGTGGT TGGAATACTG AGTGGCTTGC AGAGGCCGAC TTAGTGGTGA CTAACCCGGG TATTGCCTTA GCGACACCAG AGATACAAGA GGTTCTTGCG AAAGGAGCGC CAGTTGTTGG TGATATCGAA CTCTTCGCGT GGGCAGTCGA TAAGCCAGTT ATTGCGATTA CCGGTTCTAA TGGTAAAAGC ACAGTTACTG ACTTAACGGG TGTAATGGCG AAGGCTGCAG GCTTAACAGT GGGTGTTGGT GGCAATATCG GTGTTCCTGC TCTCGATTTG CTAGAGCAAG ATGCAGACTT GTATGTGCTT GAGTTGTCCA GTTTCCAGCT CGAAAGCACT TTAAGCCTGA AGCTTAAAGC GGCGGCGTTT CTGAACCTTT CCGAAGATCA CATGGATCGC TATGAGGGCA TGTCGGACTA CCGACAAGCT AAACTGCGCA TTTTTGATAA CGCGGAGCTG GCAGTAGTTA ACCGTGATGA TCAAGAAACC TTCCCTGATA CTGAAACACC GTTGGTGACG TTCGGAAGTG ATGAGCAAGC TTACGGCCTT GAAGCAGATG GTAACCGTAC TTGGTTGCTT GATCATGGTC AGCGTGTGAT TGCCAGTGAT GAATTAAAGC TGGTTGGTAA GCACAATCTA GCTAACGCGC TTGTGGTACT TGCTCTGCTT AAAGCGGCGG ATGTGGACTA TCACAAATCA TTGAATGCAC TGAAAACTTA CACGGGTTTG ACACATCGAT GCCAAGTGGT TGCGGATAAT CGTGGCGTAA AATGGGTGAA TGACTCTAAA GCGACCAATA TTGCGAGCAC TATAGCTGCA CTCTCTGGCT TGGAGTCGAC AGGCAAGCTG TACTTGCTTG TTGGTGGAGT TGGCAAAGGT GCTGACTTCA CTCCACTAAA ACCGATCTTC GCAACACTGA ACCTACAACT TTGCTGCTTT GGCGCGGATG GCGATGAATT TATGCCACTG CATGAATCAG CAACTCGTTT CGACACCATG GAAGATGTGA TTCAACAGAT ATCTTCGCAG TTAAAAACGG GCGATATGGT GATGCTGTCT CCGGCATGTG CTAGCTTTGA TCAATTCGAC AACTTTATGG CAAGAGGTGA CGCATTCGCT GCTCTTGCTG AGAAATACGC ATAA
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Protein sequence | MERWQNIHKV VVVGLGITGL SVVKHLTKTQ PQLTVKVIDT RATPPGTERL PEQVELHSGG WNTEWLAEAD LVVTNPGIAL ATPEIQEVLA KGAPVVGDIE LFAWAVDKPV IAITGSNGKS TVTDLTGVMA KAAGLTVGVG GNIGVPALDL LEQDADLYVL ELSSFQLEST LSLKLKAAAF LNLSEDHMDR YEGMSDYRQA KLRIFDNAEL AVVNRDDQET FPDTETPLVT FGSDEQAYGL EADGNRTWLL DHGQRVIASD ELKLVGKHNL ANALVVLALL KAADVDYHKS LNALKTYTGL THRCQVVADN RGVKWVNDSK ATNIASTIAA LSGLESTGKL YLLVGGVGKG ADFTPLKPIF ATLNLQLCCF GADGDEFMPL HESATRFDTM EDVIQQISSQ LKTGDMVMLS PACASFDQFD NFMARGDAFA ALAEKYA
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