Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00898 |
Symbol | |
ID | 5554092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 889740 |
End bp | 891104 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906392 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
Protein accession | YP_001444124 |
Protein GI | 156973217 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACAG TAACGCTTTC TCAAATTGCC GACATTACTG GCGGTGAACG GGTTGGTAAC GATCTTTCTA TTGAATCTGT TTCGACCGAC ACTCGATCTA TCGAACAAGG CGCTCTATTT GTTGCTTTGG TTGGAGAGCG TTTTGATGCT CACGACTTCT GCCAACAAGC AGTAGAGTCG GGCGCGGGCG CACTATTGGT ACAAAAACGC GTTAATGTGA ATGTGCCTCA AGTCGTTGTC GGCGATAGTA AGGTAGCATT GGGGCAAGTG GCAGCTTGGG TTCACCAAAC ATGCCAAACG CCGACGGTCG CCATTACAGG TAGCTGTGGT AAAACCACGG TAAAAGAGAT GGTTGCCAGT ATTTTGCAGT TGAAAGGTAA AGTGCTGTTT ACTGCGGGCA ACTTCAACAA CGACATTGGT GTGCCATTGA CCTTGCTGCG TTCGCAACAA GACGATGACT ACGCGGTGAT CGAGTTGGGT GCGAACCACA TTGGTGAAAT TGAGTACACC ACGCAATTAG TTAAGCCAGA CATTGCCATG GTAAACAACG TGGCTGCTGC TCACCTTGAA GGTTTCGGGT CTATCGATGG CGTGAAACAA GCTAAAGGTG AAATCTACCA AGGGCTAGCG GCTGGCGGTA TTGCGATCGT AAACCTAGAT AGCAATGGCG GAGCGAAGTG GGATGAAGTA TTAGCAGATA AGAATGTGAT TACTTTTTCA CAAAGTAACG CGGACGCTGA CTTTTACGCT TCCAACATCG TGATGAGCGC CGCAGGTGAG GCAAGCTTTG ACTTACATAT CGCTGCAACT TCACAAGAAA TTGAACTGTC TCTGGGTATT ATTGGTCAAC ACAACGTGGC TAATGCAATT GCTGCTTCTA TCATTGCCTT GAAAATGGGG GCGACATTAG AAGAGATTCG TTCAGGCCTT AAGCACTTAA ACAAGGTAAA AGGTCGTGTT GAAGTGGAAG AGTTGAGCGA TAAAATCAAG CTTATTGATG ACAGCTACAA CGCTAGCGTT CCTGCTATGA AGGCGGCGGT CGATTTACTA GCGGCATTCC AAGGCCAACG TTGGTTGATT TTAGGTAATA TGGCGGAGTT GGGTGAGGAA AGTCTTGCAC TTCACCGTCA AGTCGGGGAA CATGCTGCCC CACAAAAATT TGAACATGTT CTCACGTATG GTGCGGATGC AAAGGTCATT AGCGAGCTTT GCGATGGCAT CCATTTCGAG ACACATCAAG AGATGATTGA CTACATCAAG CAGCATCTAG ACCAAGCGGT TCCTGAACAC CACACGATGT TGGTGAAAGG CGCGAACGGT GCACGTATGT TTGAAGTCGC TGCTGCTTTG AAGGAGTACT ATTAA
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Protein sequence | MITVTLSQIA DITGGERVGN DLSIESVSTD TRSIEQGALF VALVGERFDA HDFCQQAVES GAGALLVQKR VNVNVPQVVV GDSKVALGQV AAWVHQTCQT PTVAITGSCG KTTVKEMVAS ILQLKGKVLF TAGNFNNDIG VPLTLLRSQQ DDDYAVIELG ANHIGEIEYT TQLVKPDIAM VNNVAAAHLE GFGSIDGVKQ AKGEIYQGLA AGGIAIVNLD SNGGAKWDEV LADKNVITFS QSNADADFYA SNIVMSAAGE ASFDLHIAAT SQEIELSLGI IGQHNVANAI AASIIALKMG ATLEEIRSGL KHLNKVKGRV EVEELSDKIK LIDDSYNASV PAMKAAVDLL AAFQGQRWLI LGNMAELGEE SLALHRQVGE HAAPQKFEHV LTYGADAKVI SELCDGIHFE THQEMIDYIK QHLDQAVPEH HTMLVKGANG ARMFEVAAAL KEYY
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