Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00886 |
Symbol | sspA |
ID | 5556501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 878377 |
End bp | 879012 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640906380 |
Product | stringent starvation protein A |
Protein accession | YP_001444113 |
Protein GI | 156973206 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAG CTGCCAATAA ACGTTCTGTG ATGACTCTTT TCTCAAGTGC ATCAGATTTG TATAGCCATC AGGTTCGCAT CGTACTAGCT GAAAAAGGCG TAAGTGTTGA AGTTGAGCTT GTTGATGAAG CTAACCTTCC TGCTGAGCTT GTTGAATTAA ACCCATACAA ATCAGTGCCA ACTCTTGTTG ACCGTGAGCT AGCTCTTTAC GATTCAAAAA TCATCATGGA GTACCTGGAC GAGCGTTTCC CTCATCCACC TCTAATGCCT GTTTACCCAG TTGCTCGTGG TAACAGCCGT CTGATGATGT ACCGTATTGA ACGCAACTGG TACTCACTCG CTGAAAAAGT TGTTAAGGGT AACGCTGAAG AATCAGAAAA AGCACGTACT AAACTACGTA ATGATCTTCT GACTCTTGCA CCAATCTTTG CTGAGTACGA GTACTTCATG AGCGAAGAGT TCAGCCTAAT CGATTGTTAC CTAGCTCCAC TATTGTGGCG TCTGCCTCAA CTAGGTATCG AGCTTGTAGG CCCTGGTTCA AAAGAGATCA AAGTTTACAT GAACCGCGTA TTTGAACGTG ATTCATTCCT TGCATCTCTA ACTGAAGCTG AACGTGAAAT GCGCCTAGTT CGCTAA
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Protein sequence | MAVAANKRSV MTLFSSASDL YSHQVRIVLA EKGVSVEVEL VDEANLPAEL VELNPYKSVP TLVDRELALY DSKIIMEYLD ERFPHPPLMP VYPVARGNSR LMMYRIERNW YSLAEKVVKG NAEESEKART KLRNDLLTLA PIFAEYEYFM SEEFSLIDCY LAPLLWRLPQ LGIELVGPGS KEIKVYMNRV FERDSFLASL TEAEREMRLV R
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