Gene VIBHAR_00880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00880 
Symbol 
ID5553500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp872949 
End bp874052 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content45% 
IMG OID640906374 
Producthypothetical protein 
Protein accessionYP_001444107 
Protein GI156973200 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAT TACAACGATA CCAACAAGAC ATAGCAGAGC ATGGATTCCA GCGTGATGAA 
GCCCAATATA ACGCTGTCGT TGCTTTAGAT AAACTCTACC ATGCGATTGC AGAATTTCAG
TCTGCACCTA TTCCACAGCT TAGCACTTGG CAGAAACTTC TCGGTAAAAA GCCAGAAATG
CCAGAGCCGC CAAAAGGGTT ATATTTTTGG GGCGGAGTAG GGCGAGGTAA AACCTATTTA
ATGGATGCGT TTTTTGATGC TTTGCCGACG GAAAGAAAGA TGCGAGTGCA TTTTCACCGT
TTTATGTATC GTGTGCACGA TGAGCTCAAA CGCCTTGGAG AAGTGGAAAA TCCGCTCTCG
AAAGTCGCTG ATTTATTCAA AAAAGAGGCG GATATTGTCT GTTTCGACGA GTTCTTTGTC
TCGGATATTA CCGATGCGAT GATCTTGGCG ACTTTGCTAC AAGAGATGTT TAAGCGCCAA
ATGATTTTGG TCGCAACCTC GAACATTGAG CCAGAAAACC TGTACCGTAA TGGCTTGCAA
CGAGCCCGTT TTTTACCTGC GATAAATATG ATCGTTCAGC GCTGTGATGT TCTCAATGTC
GACAGTGGGG TGGATTACCG TTTACGCACT CTACAACAAG CGGAAATCTA CCATTACCCG
CTGGATGAAC AAGCCTCCGT CAACCTTAAT AAGTATTACC ACCAACTGAT TGGTGAAAGA
AAAGTTGCAG CAAACAGCAT TGAAATTAGC CATCGCGAAG TGGCGGTGAT TGAAGCTAGT
GATGGCGTGC TACATGCTTC TTTTGAGCAA CTATGCCAAA CGCCCCGTAG TCAGAATGAC
TATATTGAAT TATCTCGTAT CTACCACACG GTATTGCTGG CAGACGTAAA GCAGATGGAT
CGTAAGATAG ATGATGCCGC GCGACGCTTT ATTGCGTTGG TGGACGAGTT CTACGAGCGT
AACGTCAAAC TGATTATTTC TGCAGAAGTG GCGATGGAAT CCCTTTATAC GCAAGGGCAG
TTGGAATTTG AGTTTAAACG TTGTCTGTCT CGATTGACCG AGATGCAAAG CCACGAATAC
CTCGCTAGAG AGCATCTGGC GTAA
 
Protein sequence
MTPLQRYQQD IAEHGFQRDE AQYNAVVALD KLYHAIAEFQ SAPIPQLSTW QKLLGKKPEM 
PEPPKGLYFW GGVGRGKTYL MDAFFDALPT ERKMRVHFHR FMYRVHDELK RLGEVENPLS
KVADLFKKEA DIVCFDEFFV SDITDAMILA TLLQEMFKRQ MILVATSNIE PENLYRNGLQ
RARFLPAINM IVQRCDVLNV DSGVDYRLRT LQQAEIYHYP LDEQASVNLN KYYHQLIGER
KVAANSIEIS HREVAVIEAS DGVLHASFEQ LCQTPRSQND YIELSRIYHT VLLADVKQMD
RKIDDAARRF IALVDEFYER NVKLIISAEV AMESLYTQGQ LEFEFKRCLS RLTEMQSHEY
LAREHLA