Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00877 |
Symbol | |
ID | 5553815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 869466 |
End bp | 870533 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906371 |
Product | protease |
Protein accession | YP_001444104 |
Protein GI | 156973197 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGCT TTTTGTTACG TTCTGTCTTT TTAGGCTTAG CAACTGCCGT CATTGTATTA CTCGCCGTTC CATCTTTGCG CAGCAATGTC ATCCCAACCG CACTTGTTGA TCCACAACCA AGCAACATCG CGTCACTCGA GGTGTCTTTT AACCAAGCGG TAAGAAAGGC AGCGCCCGCG GTAGTGAATA TCTACAGCCG TAAGTATGTG GAAAATGACC GCAGCAAGCT TTCAACTCAA GGCTTGGGCT CTGGCGTTAT TGTTAGCGAA AAAGGCTACA TCATTACTAA CTACCACGTA GTGGCTCAAG CTGACCAAAT CGTGGTTGCG CTACAAGATG GCCGCGTCGC TGCAGCTCAA TTGGTTGGTA CTGATAAGCA TACGGACATT GCGATCCTAC GTGTCGAAGG TTCTAACCTT CCTGTTATCC CACTCAATCC AGAATACAAA CCTCGAGTTG GTGATGTCGT CCTAGCAATT GGCAACCCGT ACAACTTAGG TCAAACCACC ACATTCGGCA TTATTTCAGC AACAGGTCGT TGGTCAATCA GTGATGGTCG CCAAGCCTTT ATCCAAACCG ATGCAGCAAT CAACGAAGGT AACTCGGGGG GTGCTTTGGT CAACACGCAA GGTGAATTGG TAGGCATAAA TACGGCTTCA TTCCAACAGG CGACAGACCT TGAGACCTAC GGCATCTCCT TTGCAATTCC AGCCCCTATA GCAAACAAGA TCATGCAGAA AATCATCGCA GATGGTCGTG TAATCCGAGG CTACATTGGT ATTGATGGGC AAGATATTAA TGCGGTAACT GCTCGCTTGT TAGGTAACGA ACACATTGGT GGCATCGTGG TGTTAGGCAT TGACCCGAAT GGTCCTGCGA GTGATGCTGG TTTTGAGAAA CAAGACATCA TCATCAGTAT TAACGGTACG AAAGTTCAAG GACTCCAAAG CGTGATGGAC ATCGTCACTG ACCTACGTCC GGGCACCTCC GTCGATATTG GCATTATCCG CAAGGGTAAA GAAATGAACT TAAAAGTCAC CATCGCCGAA GACAAACAAG AAGCATAA
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Protein sequence | MLSFLLRSVF LGLATAVIVL LAVPSLRSNV IPTALVDPQP SNIASLEVSF NQAVRKAAPA VVNIYSRKYV ENDRSKLSTQ GLGSGVIVSE KGYIITNYHV VAQADQIVVA LQDGRVAAAQ LVGTDKHTDI AILRVEGSNL PVIPLNPEYK PRVGDVVLAI GNPYNLGQTT TFGIISATGR WSISDGRQAF IQTDAAINEG NSGGALVNTQ GELVGINTAS FQQATDLETY GISFAIPAPI ANKIMQKIIA DGRVIRGYIG IDGQDINAVT ARLLGNEHIG GIVVLGIDPN GPASDAGFEK QDIIISINGT KVQGLQSVMD IVTDLRPGTS VDIGIIRKGK EMNLKVTIAE DKQEA
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