Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00834 |
Symbol | |
ID | 5553894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 823458 |
End bp | 825410 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906328 |
Product | PTS system, mannitol-specific II ABC component |
Protein accession | YP_001444062 |
Protein GI | 156973155 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATATCAC CAGATGCCAA GATCAAGATA CAAAATTTTG GTCGTTTTCT GTCAAACATG GTAATGCCAA ACATCGGCGC GTTTATCGCG TGGGGCTTTA TCACTGCTCT ATTTATCCCA ACTGGATGGC TGCCAAACGA GACCTTGGCA TCTATGGTTG GCCCTATGAT CACCTACTTG CTGCCACTGC TTATCGGTTA CACCGGTGGT AAATTGGTTG GTGGCGATCG CGGTGCGGTA GTCGGTGCAA TCACAACAAT GGGCGTGATT GTCGGTACCG ACATCCCAAT GTTTATGGGC GCAATGATGG TCGGCCCGAT GGGCGGCTGG GCTATCAAGA AATTCGATAA CTACATCGAC GGTAAAGTGA AAAGCGGTTT CGAGATGTTG GTCAACAACT TCTCTGCAGG CATCATCGGT ATGCTGTGTG CGATCCTTGC TTTCCTGTTT ATCGGTCCAT TCGTAAAAAT TCTTTCTGGT GGCTTGGCAG CAGGCGTTAA CTTCCTAGTT TCTGCTCACC TTCTACCACT GACCTCAATC TTCGTTGAAC CTGCGAAGAT CCTGTTCCTA AACAACGCGA TCAACCACGG TATCTTCTCT CCATTAGGTA TCCAACAAGC GTCTGAGACA GGTCAATCGA TCTTCTTCCT AATCGAAGCA AACCCAGGTC CTGGTCTAGG TATCCTGCTA GCTTACATGG TGTTTTGTAA AGGTACGGCT CGTCAAACTG CAGGTGGTGC ATCAATCATC CACTTCTTCG GCGGCATCCA CGAGATTTAC TTCCCGTACA TCCTAATGAA CCCTCGCCTA ATCCTTGCGG CTATCGCAGG TGGTATGACT GGCGTATTCG TTCTCACTAT CTTTAACGCA GGTATCGTTT CTCCAGCATC GCCAGGTTCA ATCTTTGCAA TCTTGTTGAT GACTCAGAAA GGTTCAATCG TTGGTGTACT AGCGTCTATC GCAGCAGCAA CAGGCGTGTC ATTCGCCGTA GCAGCACTGC TAATGAAGAC ACAAACGTCA ACAGAAGAAG ACGGTGATGA AGCAGCACTA GAAAAAGCAA CATCACAAAT GAAAGACATG AAATCTGCAT CTAAAAACGA TGCGGTGGTA AACAGCCAAA GCAAAGGTGA CGTAGACCTA GCGACAGTAC AAAGCATCAT TGTCGCTTGT GATGCGGGCA TGGGTTCGAG TGCAATGGGC GCGAGCATGC TACGCAAAAA GGTTCAAGAC GCAGGTCTGA ACATCCACGT AACCAACCTT GCCATTAACA GCTTACCAGA GAGTGCAGAT ATCGTGATTA CTCATAAAGA CTTAACGGAT CGTGCACGTA AGCATGCTCC AAACGCACAC CACATTTCAT TGACTAACTT CTTAGACAGC GAAATGTACA ACCAGCTAGT CACCAAACTA CTAGCAGCAC AAAACCAATC CGCAGCCAAT GACGACCAGA TGGTAAAAGT GTCCGTCATG GCGGCGAACG ACGACAGCTT TGAACCACAA CAACCATCGG TATTCCAAAT CCAGCGTGAG AACATTCACC TAGGTTTGAA AGCAGCCAAC AAAGAAGAAG CAATTCGCTT TGCAGGCAAC AAATTGGTTG AACTTGGCTA CGCAGAACCA GAATACGTAG ACGCGATGTT TGAGCGTGAA GCGTTGGTTT CAACGTACCT AGGCGAATCT ATCGCAGTAC CTCACGGTAC GGTAGAAGCG AAAGACCGCG TGAAGAAAAC TGGCATTGTA ATCTGCCAAT ACCCATCGGG TATCCAATTT ACTGAAGACG ACGATGATGT AGCGAAACTG GTTATCGGCA TTGCCGCTAA GAACGATGAG CACATCCAGG TGATTACCAC CATTACAAAC GCGCTCGATG AGCCGGAGGC AATTGAGAAG CTAACTAGCA CCAACGATGT AGAAGAGATT CTGAACATCC TTGGCGGCCA GCAAGCGGCT TAA
|
Protein sequence | MISPDAKIKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWLPNETLA SMVGPMITYL LPLLIGYTGG KLVGGDRGAV VGAITTMGVI VGTDIPMFMG AMMVGPMGGW AIKKFDNYID GKVKSGFEML VNNFSAGIIG MLCAILAFLF IGPFVKILSG GLAAGVNFLV SAHLLPLTSI FVEPAKILFL NNAINHGIFS PLGIQQASET GQSIFFLIEA NPGPGLGILL AYMVFCKGTA RQTAGGASII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFVLTIFNA GIVSPASPGS IFAILLMTQK GSIVGVLASI AAATGVSFAV AALLMKTQTS TEEDGDEAAL EKATSQMKDM KSASKNDAVV NSQSKGDVDL ATVQSIIVAC DAGMGSSAMG ASMLRKKVQD AGLNIHVTNL AINSLPESAD IVITHKDLTD RARKHAPNAH HISLTNFLDS EMYNQLVTKL LAAQNQSAAN DDQMVKVSVM AANDDSFEPQ QPSVFQIQRE NIHLGLKAAN KEEAIRFAGN KLVELGYAEP EYVDAMFERE ALVSTYLGES IAVPHGTVEA KDRVKKTGIV ICQYPSGIQF TEDDDDVAKL VIGIAAKNDE HIQVITTITN ALDEPEAIEK LTSTNDVEEI LNILGGQQAA
|
| |