Gene VIBHAR_00834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00834 
Symbol 
ID5553894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp823458 
End bp825410 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content48% 
IMG OID640906328 
ProductPTS system, mannitol-specific II ABC component 
Protein accessionYP_001444062 
Protein GI156973155 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCAC CAGATGCCAA GATCAAGATA CAAAATTTTG GTCGTTTTCT GTCAAACATG 
GTAATGCCAA ACATCGGCGC GTTTATCGCG TGGGGCTTTA TCACTGCTCT ATTTATCCCA
ACTGGATGGC TGCCAAACGA GACCTTGGCA TCTATGGTTG GCCCTATGAT CACCTACTTG
CTGCCACTGC TTATCGGTTA CACCGGTGGT AAATTGGTTG GTGGCGATCG CGGTGCGGTA
GTCGGTGCAA TCACAACAAT GGGCGTGATT GTCGGTACCG ACATCCCAAT GTTTATGGGC
GCAATGATGG TCGGCCCGAT GGGCGGCTGG GCTATCAAGA AATTCGATAA CTACATCGAC
GGTAAAGTGA AAAGCGGTTT CGAGATGTTG GTCAACAACT TCTCTGCAGG CATCATCGGT
ATGCTGTGTG CGATCCTTGC TTTCCTGTTT ATCGGTCCAT TCGTAAAAAT TCTTTCTGGT
GGCTTGGCAG CAGGCGTTAA CTTCCTAGTT TCTGCTCACC TTCTACCACT GACCTCAATC
TTCGTTGAAC CTGCGAAGAT CCTGTTCCTA AACAACGCGA TCAACCACGG TATCTTCTCT
CCATTAGGTA TCCAACAAGC GTCTGAGACA GGTCAATCGA TCTTCTTCCT AATCGAAGCA
AACCCAGGTC CTGGTCTAGG TATCCTGCTA GCTTACATGG TGTTTTGTAA AGGTACGGCT
CGTCAAACTG CAGGTGGTGC ATCAATCATC CACTTCTTCG GCGGCATCCA CGAGATTTAC
TTCCCGTACA TCCTAATGAA CCCTCGCCTA ATCCTTGCGG CTATCGCAGG TGGTATGACT
GGCGTATTCG TTCTCACTAT CTTTAACGCA GGTATCGTTT CTCCAGCATC GCCAGGTTCA
ATCTTTGCAA TCTTGTTGAT GACTCAGAAA GGTTCAATCG TTGGTGTACT AGCGTCTATC
GCAGCAGCAA CAGGCGTGTC ATTCGCCGTA GCAGCACTGC TAATGAAGAC ACAAACGTCA
ACAGAAGAAG ACGGTGATGA AGCAGCACTA GAAAAAGCAA CATCACAAAT GAAAGACATG
AAATCTGCAT CTAAAAACGA TGCGGTGGTA AACAGCCAAA GCAAAGGTGA CGTAGACCTA
GCGACAGTAC AAAGCATCAT TGTCGCTTGT GATGCGGGCA TGGGTTCGAG TGCAATGGGC
GCGAGCATGC TACGCAAAAA GGTTCAAGAC GCAGGTCTGA ACATCCACGT AACCAACCTT
GCCATTAACA GCTTACCAGA GAGTGCAGAT ATCGTGATTA CTCATAAAGA CTTAACGGAT
CGTGCACGTA AGCATGCTCC AAACGCACAC CACATTTCAT TGACTAACTT CTTAGACAGC
GAAATGTACA ACCAGCTAGT CACCAAACTA CTAGCAGCAC AAAACCAATC CGCAGCCAAT
GACGACCAGA TGGTAAAAGT GTCCGTCATG GCGGCGAACG ACGACAGCTT TGAACCACAA
CAACCATCGG TATTCCAAAT CCAGCGTGAG AACATTCACC TAGGTTTGAA AGCAGCCAAC
AAAGAAGAAG CAATTCGCTT TGCAGGCAAC AAATTGGTTG AACTTGGCTA CGCAGAACCA
GAATACGTAG ACGCGATGTT TGAGCGTGAA GCGTTGGTTT CAACGTACCT AGGCGAATCT
ATCGCAGTAC CTCACGGTAC GGTAGAAGCG AAAGACCGCG TGAAGAAAAC TGGCATTGTA
ATCTGCCAAT ACCCATCGGG TATCCAATTT ACTGAAGACG ACGATGATGT AGCGAAACTG
GTTATCGGCA TTGCCGCTAA GAACGATGAG CACATCCAGG TGATTACCAC CATTACAAAC
GCGCTCGATG AGCCGGAGGC AATTGAGAAG CTAACTAGCA CCAACGATGT AGAAGAGATT
CTGAACATCC TTGGCGGCCA GCAAGCGGCT TAA
 
Protein sequence
MISPDAKIKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWLPNETLA SMVGPMITYL 
LPLLIGYTGG KLVGGDRGAV VGAITTMGVI VGTDIPMFMG AMMVGPMGGW AIKKFDNYID
GKVKSGFEML VNNFSAGIIG MLCAILAFLF IGPFVKILSG GLAAGVNFLV SAHLLPLTSI
FVEPAKILFL NNAINHGIFS PLGIQQASET GQSIFFLIEA NPGPGLGILL AYMVFCKGTA
RQTAGGASII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFVLTIFNA GIVSPASPGS
IFAILLMTQK GSIVGVLASI AAATGVSFAV AALLMKTQTS TEEDGDEAAL EKATSQMKDM
KSASKNDAVV NSQSKGDVDL ATVQSIIVAC DAGMGSSAMG ASMLRKKVQD AGLNIHVTNL
AINSLPESAD IVITHKDLTD RARKHAPNAH HISLTNFLDS EMYNQLVTKL LAAQNQSAAN
DDQMVKVSVM AANDDSFEPQ QPSVFQIQRE NIHLGLKAAN KEEAIRFAGN KLVELGYAEP
EYVDAMFERE ALVSTYLGES IAVPHGTVEA KDRVKKTGIV ICQYPSGIQF TEDDDDVAKL
VIGIAAKNDE HIQVITTITN ALDEPEAIEK LTSTNDVEEI LNILGGQQAA