Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00830 |
Symbol | |
ID | 5554394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 818698 |
End bp | 819459 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906324 |
Product | transcriptional regulator |
Protein accession | YP_001444058 |
Protein GI | 156973151 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAC GAAACACTCA ACTAAGAAGA CACGCCATTT CTAACCTAGT AAGTGAGCTT GGGGAAGTTA GCGTTGATGA GCTAGCACAG AAATTTGAAA CCTCAGAGGT CACGATTAGA AAGGACTTAG CTTCTTTGGA GAAAAACGGA CAACTTTTGC GCCGTTATGG TGGCGCAATC TCTATTCCAA CGGAAGTTAT CCATGAAGAA TTGAGTCCAA TTGTTTCGAG TCGAAAGTTA AGTCTAGCAA AAGCAGCCGC ATCACTGATT CGAGAGCATA ACCGAATTGT GATCGACAGT GGCAGCACGA CTGCGGCGCT GATTCAGCAA TTAAACGACA AACGAGGCTT GGTTGTTATG ACCAACTCGT TGCATGTTGC GAACGCACTT AACGAATTAG AGAGCGAACC AACCCTGTTA ATGACAGGCG GCACTTGGGA TACGCACTCA GAATCCTTCC AAGGCAAAGT AGCCGAATCT GTATTGAGAG CTTACGACTT TGACCAGCTA TTTATCGGTG CTGACGGTAT CGATCTAGAG CGCGGAACCA CAACGTTTAA TGAATTGGTT GGCTTAAGTA AAGTCATGGC GGAGGTGTCT CGTGAAGTCA TCGTCATGAT CGAGTCTGAG AAAGTGGGGC GTAAGATCCC GAACTTAGAA CTTGCTTGGG ACCAAATTGA TGTGTTGGTT ACCGATGCAG AGTTGCAGCC AGAACACAGA GCAAAGATTG AACAACATAG CGTAAAAGTC ATTTGCGCCT AA
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Protein sequence | MSKRNTQLRR HAISNLVSEL GEVSVDELAQ KFETSEVTIR KDLASLEKNG QLLRRYGGAI SIPTEVIHEE LSPIVSSRKL SLAKAAASLI REHNRIVIDS GSTTAALIQQ LNDKRGLVVM TNSLHVANAL NELESEPTLL MTGGTWDTHS ESFQGKVAES VLRAYDFDQL FIGADGIDLE RGTTTFNELV GLSKVMAEVS REVIVMIESE KVGRKIPNLE LAWDQIDVLV TDAELQPEHR AKIEQHSVKV ICA
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