Gene VIBHAR_00825 details

Gene Information

• Locus tag: VIBHAR_00825
• ID: 5554402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 811711
• End bp: 813435
• Gene Length: 1725 bp
• Protein Length: 574 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640906319
• Product: acetolactate synthase 3 catalytic subunit
• Protein accession: YP_001444053
• Protein GI: 156973146
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
• TIGRFAM ID: [TIGR00118] acetolactate synthase, large subunit, biosynthetic type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAA TGTTGTCAGG CGCAGAGATG GTAGTGCAAT CTCTGATCGA AGAGAGCGTA 
GAACAAATCT TTGGTTACCC AGGTGGTTCC GTTTTAGATA TCTACGATGC CCTGCACGCC 
AAAACCGATC AAATCAAACA CGTACTAGTA AGACATGAAC AAGCTGCCAC TCACATGGCG 
GATGGTTATG CCCGAGCAAC TGGGAAGCCG GGTGTAGTAC TGGTATGTTC GGGTCCAGGC 
GCGACCAATA CCATCACAGG TATTGCGACG GCGTACATGG ACTCCATTCC AATGATTGTC 
ATTTCAGGTA ACGTGCCAAA CAACCTGATT GGTAATGATG CCTTTCAAGA GTGTGACATC 
GTGGGTGTAT CACGCCCAGT AGTGAAACAC AGCTTCTTAG TAAAAAAAGC AGAAGACATT 
CCAGAGACGA TCAAAAAGGC GTTTTACATC TCGACAACTG GCCGTCCTGG TCCGGTTGTG 
ATTGATTTGC CAAAAGACAT TTTAAACCCG CAAATCAAGC TTCCTTACGA GTATCCAGAA 
AGCATTTCGA TGCGTTCATA CAAACCGACG ACATCAGGTC ACAAAGGTCA GATCAAAAAA 
GCATTGAAGT CGCTTGTTGA GGCGAAGAAG CCGGTATTGT ACATCGGTGG TGGTGCCGTT 
ATTTCTGGTG CCCATGAGCA TATCCAGGCG CTATCAGATG AATTGAACTT GCCTGTAGTA 
AGTACACTGA TGGGGTTAGG TGCTTTCCCT GGTACGCATA AAAACTCGCT GGGCATGTTA 
GGCATGCATG GTACCTATGA AGCCAACATG GCGATGCACG AAGCGGATCT TATCTTCGGT 
ATTGGGGTCC GTTTTGACGA CCGTACCACC AACAACCTAG AGAAGTACTG TCCGAATGCC 
AAAGTGATGC ACATTGACAT CGATCCTTCT TCCATTTCTA AAAATGTGAA AGTGGATCTG 
CCAATCGTAG GCTCCGCGGA TAAAGTCTTG GCAACTATGA TGGGCCTATT GAAAGAGCAA 
GGCAGCAGCA ACGATCAAGA TGCGATCACC CAGTGGTGGG AAGAGATCCA AGTATGGCGT 
GATCGTCAGT GTTTGGCCTA CGAAACCTCT CCTGAGCGTA TCAAGCCTCA ACAGGTGATT 
GAAACCCTAC ACAAGCTAAC CAATGGTGAT GCTTACGTGG CGTCTGATGT TGGTCAGCAC 
CAAATGTTTG CAGCGCTTTA CTATCCATTT AATAAGCCAC GCCGTTGGAT TAACTCAGGT 
GGCCTTGGCA CCATGGGCTT CGGTCTGCCT GCTGCTATGG GCGTGAAGTT CGCGATGCCA 
GAAGAAGAAG TGGTGGTGGT GACTGGTGAC GGCAGTATTC AGATGAACAT CCAAGAACTG 
TCGACAGCAA TGCAATACGA CATCCCAGTG AAGATCATCA ACCTGAACAA CCGATTTTTG 
GGTATGGTAA AACAGTGGCA AGACATTATT TACCAAGGTC GTCACTCCAA TTCATACATG 
AGTTCTGTTC CTGATTTTGC AGCGATTGCA GAAGCTTATG GTCACGTCGG TATTCGTATC 
GAAACGCCAG ATCAGCTTGA AGCAGGTCTA CAAAAAGCGT TAGACATGAA AGATCGTTTG 
GTGTTTGTCG ACATCAACGT AGATGAAACC GAACACGTTT ACCCAATGCA GATCAAAGGC 
GAGGGTATGG ACAAGATGTG GCTAAGCAAA ACGGAGCGTA CTTAA 

 

Protein sequence

MTAMLSGAEM VVQSLIEESV EQIFGYPGGS VLDIYDALHA KTDQIKHVLV RHEQAATHMA 
DGYARATGKP GVVLVCSGPG ATNTITGIAT AYMDSIPMIV ISGNVPNNLI GNDAFQECDI 
VGVSRPVVKH SFLVKKAEDI PETIKKAFYI STTGRPGPVV IDLPKDILNP QIKLPYEYPE 
SISMRSYKPT TSGHKGQIKK ALKSLVEAKK PVLYIGGGAV ISGAHEHIQA LSDELNLPVV 
STLMGLGAFP GTHKNSLGML GMHGTYEANM AMHEADLIFG IGVRFDDRTT NNLEKYCPNA 
KVMHIDIDPS SISKNVKVDL PIVGSADKVL ATMMGLLKEQ GSSNDQDAIT QWWEEIQVWR 
DRQCLAYETS PERIKPQQVI ETLHKLTNGD AYVASDVGQH QMFAALYYPF NKPRRWINSG 
GLGTMGFGLP AAMGVKFAMP EEEVVVVTGD GSIQMNIQEL STAMQYDIPV KIINLNNRFL 
GMVKQWQDII YQGRHSNSYM SSVPDFAAIA EAYGHVGIRI ETPDQLEAGL QKALDMKDRL 
VFVDINVDET EHVYPMQIKG EGMDKMWLSK TERT