Gene VIBHAR_00816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00816 
Symbol 
ID5556115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp798595 
End bp799686 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID640906310 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001444044 
Protein GI156973137 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA AATCATACAA AGTTGCCGTT TTACCAGGCG ACGGCATCGG CCCAGAAGTA 
ATGGCGCAAG CACATAAAGT GTTGGATGCA ATCGAAAAGA AGCACGGCAT TACGTTTGAG 
CGTGACGAGC ACGATGTAGG TGGTATCGCG ATCGATAATC ACGGCTGTCC ACTTCCAGAA 
AGCACCGTGA AAGCGTGTGA AGAGTCTGAT GCAGTCCTAT TTGGTTCAGT TGGCGGTCCT 
AAGTGGGAAC ACTTGCCACC AAATGACCAA CCTGAACGCG GCGCCCTACT GCCACTACGC 
AAACACTTCC AACTGTTCTG TAATTTACGC CCAGCACAAA TTCACTCAGG TCTTGAAGCC 
TTCTCGCCAC TACGTGCAGA CATCTCAGGT CGCGGCTTTG ACATCGTTGT TGTTCGTGAA 
CTGACGGGCG GCATCTACTT CGGCCAACCA AAAGGTCGTG AAGGCGAAGG TCCAACAGAG 
AAAGCGTTCG ATACTGAGGT GTACCACCGC TACGAGGTTG AACGCATTGC AAAAATTGCC 
TTTGAGTCTG CTCGTCTACG TCGCAAAAAA GTGTGCTCTA TCGACAAAGC GAACGTTCTA 
CAAAGTTCTA TCTTATGGCG TGAAGTGGTC GAAGAAATCG CAAAAGACTA CCCAGATGTT 
GAGCTGTCAC ACATGTACAT TGATAACGCA ACCATGCAGC TTATCAAAGA CCCAGCACAG 
TTCGACGTAA TGCTATGCTC AAACATCTTC GGCGACATCA TTTCTGATGA GTGCGCGATG 
ATCACTGGCT CTATGGGTAT GTTGCCATCA GCGAGCCTAA ACGAAAGCAA ATTCGGTCTG 
TACGAGCCAG CAGGCGGCAG TGCACCAGAT ATCGCAGGTA AGAACATCGC TAACCCAGTG 
GCGCAAATCC TATCAGCGGC ACTGATGCTG CGTTACAGCC TAGGTGAAGA AACGGCGGCA 
CAAGACATCG AAACGGCCGT TTCAAAAGCA CTATCTGCAG GTGAGCTAAC GGGTGACCTT 
GCCGGTGACA ACCCAGCACT TACAACATCT GAGATGGGCG ATAAGATCGC TGAGTACATC 
TTAAACTCTT AA
 
Protein sequence
MTDKSYKVAV LPGDGIGPEV MAQAHKVLDA IEKKHGITFE RDEHDVGGIA IDNHGCPLPE 
STVKACEESD AVLFGSVGGP KWEHLPPNDQ PERGALLPLR KHFQLFCNLR PAQIHSGLEA 
FSPLRADISG RGFDIVVVRE LTGGIYFGQP KGREGEGPTE KAFDTEVYHR YEVERIAKIA 
FESARLRRKK VCSIDKANVL QSSILWREVV EEIAKDYPDV ELSHMYIDNA TMQLIKDPAQ 
FDVMLCSNIF GDIISDECAM ITGSMGMLPS ASLNESKFGL YEPAGGSAPD IAGKNIANPV 
AQILSAALML RYSLGEETAA QDIETAVSKA LSAGELTGDL AGDNPALTTS EMGDKIAEYI 
LNS