Gene VIBHAR_00809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00809 
SymbolpdxA 
ID5556097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp789643 
End bp790644 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content46% 
IMG OID640906303 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001444037 
Protein GI156973130 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCAA CTAATTCGAT TCGTAGAATC GTCGTGACCT CAGGGGAACC TGCGGGCATC 
GGCCCTGATT TGGTGCTGGC CTTATCTAAG GAAGACTGGG CGCACCAAAT CGTCGTATGT 
GCAGACAAAA ATGTATTGGC AGAAAGAGCC AATCAACTTG GCATAAACGT TCAACTGTTT 
GATTACAATC CAGAAGAAGC ACCCAAAGCG CAACAAGCTG GCACCCTAAT CGTAGACCAC 
ATCGAAATCG CAGAGACTGC GGTGGCAGGT CAACTTAATG AAGCCAACGG CCACTACGTA 
TTAAAAACGC TAGAAAGAGC CGCTTTGGGC TGTATGAATG ATGAATTTGA TGCTATTGTC 
ACCGGCCCTG TACATAAGGG GGTGATAAAT CGCTCAGGTG TAGCGTTCAG TGGACATACT 
GAATTCTTCG CCGAGAAGTC CAACACACCG TTGGTCGTGA TGATGCTAGC CACTGAAGGC 
CTGCGAGTTG CTCTAGTAAC AACGCATATC CCTTTGGCTT ACGTATCTAA AGCCGTCACG 
GAAGAGCGAT TAGAAAAAAT CATCGATATT CTTCATAAAG ATCTTGTAGA AAAATTTGCC 
ATCTCGCAGC CAAACATCTA TGTTTGCGGG CTAAATCCAC ATGCGGGAGA AGATGGCTGT 
TTGGGTCGCG AAGAGATCGA GACCATCACT CCGACATTGG AAAAGATTCG ACAAGAAAAA 
GGAATCAATC TGATCGGCCC ATTGCCGGCA GACACCATTT TCAATGAAAA GTATTTAAAC 
GATGCTGATG CTGTTTTAGG TATGTACCAC GATCAAGTGT TGCCAGTATT AAAATACAAA 
GGCTTTGGTC GTTCAGTAAA CATTACGCTT GGTCTACCAT TTATAAGAAC CTCGGTGGAT 
CACGGTACTG CATTAGAGCT GGCAGGTACA GGTCAAGCGG ATACAGGGAG CTTCCGAACA 
GCGCTCACGC ATGCGATAGA ATTGGTAGAG AAGAAACAAT GA
 
Protein sequence
MMATNSIRRI VVTSGEPAGI GPDLVLALSK EDWAHQIVVC ADKNVLAERA NQLGINVQLF 
DYNPEEAPKA QQAGTLIVDH IEIAETAVAG QLNEANGHYV LKTLERAALG CMNDEFDAIV 
TGPVHKGVIN RSGVAFSGHT EFFAEKSNTP LVVMMLATEG LRVALVTTHI PLAYVSKAVT 
EERLEKIIDI LHKDLVEKFA ISQPNIYVCG LNPHAGEDGC LGREEIETIT PTLEKIRQEK 
GINLIGPLPA DTIFNEKYLN DADAVLGMYH DQVLPVLKYK GFGRSVNITL GLPFIRTSVD 
HGTALELAGT GQADTGSFRT ALTHAIELVE KKQ