Gene VIBHAR_00745 details

Gene Information

• Locus tag: VIBHAR_00745
• Symbol: rplF
• ID: 5556003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 729133
• End bp: 729666
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906239
• Product: 50S ribosomal protein L6
• Protein accession: YP_001443973
• Protein GI: 156973066
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TTGCAAAAGC ACCTGTCGCT ATTCCAGCTG GCGTAGAGGT GAAACTAAAC 
GGCCAAGAAA TCACTGTAAA AGGTGCTAAA GGCGAACTGA CTCGCGTTCT AAACGACGCT 
GTAGTTATCG CTCAGGAAGA AAACAACCTA ACTTTCGGTC CGAAAGAAGG TGCTGCTAAC 
GCATGGGCAC AAGCTGGTAC AGCTCGCGCT CTAGTTAACA ACATGGTTGT TGGTGTTACT 
GAAGGCTTTA CTAAGAAGCT AACTCTTAAA GGTGTTGGTT ACCGTGCTGC TATTAAAGGC 
AACGCTGTAG GTCTAACACT AGGCTTCTCT CACCCAGTTG AGCACGAGTT GCCAGCGGGT 
ATTAAAGCTG AATGTCCAAG CCAAACTGAA ATCATCATTA CTGGTTGTGA TAAGCAACTA 
GTTGGTCAAG TTGCGGCTGA CATTCGTTCT TACCGTCAAC CTGAGCCTTA CAAAGGTAAA 
GGTGTTCGTT ACGCAGATGA AAATGTGCGT ACTAAAGAAG CTAAGAAGAA GTAA 

 

Protein sequence

MSRVAKAPVA IPAGVEVKLN GQEITVKGAK GELTRVLNDA VVIAQEENNL TFGPKEGAAN 
AWAQAGTARA LVNNMVVGVT EGFTKKLTLK GVGYRAAIKG NAVGLTLGFS HPVEHELPAG 
IKAECPSQTE IIITGCDKQL VGQVAADIRS YRQPEPYKGK GVRYADENVR TKEAKKK