Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00736 |
Symbol | rpsC |
ID | 5555264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 725380 |
End bp | 726078 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906230 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001443964 |
Protein GI | 156973057 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAAA AAGTACATCC TAATGGTATT CGTCTTGGCA TCGTTAAGCC TTGGAATGCT ACATGGTTTG CTAACACCAA AGATTTCGCT GACAACCTAG ACGGCGACTT CAAGGTACGT CAGTTCCTAA CTAAGGAACT ACAAAAAGCG TCTCTTTCAC GCATCGTTAT CGAGCGTCCT GCTAAGAGCA TCCGTGTGAC TATTCACACT GCTCGTCCAG GCGTTGTAAT CGGTAAGAAA GGTGAAGACG TTGAGAAACT ACGCGCAGCT GTAGCAAAAA TTGCAGGTGT ACCAGCGCAA ATTAACATCG CTGAAGTACG TAAGCCTGAA CTTGATGCAC AACTTGTTGG TGACAGCATC GCGTCTCAAC TAGAGCGTCG TGTTATGTTC CGTCGTGCTA TGAAGCGCGC GGTACAAAAC GCAATGCGTC TAGGTGCTAA AGGCATCAAA GTAGAAGTAA GTGGTCGTCT AGGCGGCGCT GAAATTGCAC GTTCTGAGTG GTACCGTGAA GGTCGTGTAC CTCTACACAC TCTACGTGCT GACATTGATT ACGCAACTTC TTCGGCTCAC ACTCAATACG GTGTGATCGG CATTAAAACT TGGATCTTCA AAGGTGAGAT CCTAGGTGGT ATGCCAGCAG CTAACGCTGT AGAGCCTAAA GGCGACAAGC CTAAGAAGCA GCGTAAAGGC CGTAAGTAA
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Protein sequence | MGQKVHPNGI RLGIVKPWNA TWFANTKDFA DNLDGDFKVR QFLTKELQKA SLSRIVIERP AKSIRVTIHT ARPGVVIGKK GEDVEKLRAA VAKIAGVPAQ INIAEVRKPE LDAQLVGDSI ASQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARSEWYRE GRVPLHTLRA DIDYATSSAH TQYGVIGIKT WIFKGEILGG MPAANAVEPK GDKPKKQRKG RK
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