Gene VIBHAR_00730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00730 
SymbolrplC 
ID5555227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp722330 
End bp722959 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content46% 
IMG OID640906224 
Product50S ribosomal protein L3 
Protein accessionYP_001443958 
Protein GI156973051 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTC TAATCGGTCG TAAAGTGGGC ATGACCCGCG TATTTACTGA AGACGGCGTT 
TCTATCCCAG TAACAGTTGT TGAAGTTGAA GCAAACCGTG TTTCTCAAGT TAAAACTCTT 
GAGACAGATG GCTACGCTGC AATCCAGGTA ACTGCTGGTT CAAAGAAAGC TAACCGTGTA 
AACAAAGCTG AAGCAGGTCA CTTTGCTAAA GCTGGCGTTG AAGCTGGTCG TGGTCTTTGG 
GAATTCCGTT TGGAAAACGG TGAAGAGTTC GCAGTTGGCG CTGAGCTAAC AGTTGAACTA 
TTCAACGAAA CTAAGAAAGT AGACGTTACT GGTACATCTA AGGGTAAAGG TTTCCAAGGC 
GCTGTTAAGC GTTGGAACTT CCGTACTCAA GATATGACTC ACGGTAACTC ATTGTCTCAC 
CGTGCACCGG GTTCAATTGG CCAATGTCAA ACTCCAGGTC GCGTATTTAA AGGCAAGAAA 
ATGGCAGGTC ACATGGGTGC TGAGCGTGTA ACGACTCAAA ACCTAGAGAT CGTACGTGTT 
GACGCTGAGC GCAATCTGCT TCTTATTAAA GGTGCAGTAC CAGGCTCAAC AGGTGGCAAC 
GTGATCGTTA AACCAGCTGT TAAAGCATAA
 
Protein sequence
MIGLIGRKVG MTRVFTEDGV SIPVTVVEVE ANRVSQVKTL ETDGYAAIQV TAGSKKANRV 
NKAEAGHFAK AGVEAGRGLW EFRLENGEEF AVGAELTVEL FNETKKVDVT GTSKGKGFQG 
AVKRWNFRTQ DMTHGNSLSH RAPGSIGQCQ TPGRVFKGKK MAGHMGAERV TTQNLEIVRV 
DAERNLLLIK GAVPGSTGGN VIVKPAVKA