Gene VIBHAR_00706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00706 
Symbol 
ID5554931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp697668 
End bp698834 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content43% 
IMG OID640906201 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001443935 
Protein GI156973028 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CTGTTGCTGG TACCGGTTAT GTTGGGCTTT CCAACGCAAT GTTGTTAGCT 
CAAAACCACG AAGTGGTTGC ACTAGATATC GTTCCTGAAA AGGTTGAATT GCTTAACAAA 
CAACAATCTC CAATTGTTGA TGCTGAGATT GAGCATTTCC TTGAAAACAG GGAACTTAAC 
TTCATCGCAA CAACCGATAA GCAGAAAGCT TATAAAGGTG CAGAGTACGT TGTGATCGCA 
ACACCAACGG ATTATGACTC AGTCACGCAT TACTTCAATA CTTCTTCTGT TGAAGCGGTG 
ATTAAAGATG TTATGTCTAT CAATCCTAAT GCAGTAATGG TGATTAAGTC TACTGTCCCT 
GTGGGTTACA CGGCTCGCAT CAAAGAAGAA TTGGGGTGTG AGAATGTCAT CTTTTCTCCA 
GAGTTCCTGC GTGAGGGCAA AGCGCTTTAC GATAACCTTC ACCCATCACG TATCATTGTT 
GGTGAGCGTA GTGAACGTGC CGAAGTGTTT GCTGGCTTGC TGGTGGAAGG GGCAGTAAAA 
GACGATATTC AAGTTCTATT TACTGATTCG ACAGAAGCTG AAGCAGTAAA ACTATTTTCA 
AACACCTACC TTGCTATGCG TGTCGCGTAC TTCAATGAGC TAGATTCTTA CGCAGAAGCT 
CATGGCTTGG ACGCTCGTCA AATCATTGAA GGTGTTGGCT TAGATCCTCG TATAGGTAAT 
CATTACAACA ACCCATCATT TGGTTACGGT GGTTACTGCT TACCAAAAGA CACTAAACAG 
CTTTTAGCCA ATTACCAAGA TGTACCAAAC AACATCATTG GTGCGATTGT TGATGCTAAC 
CGTACTCGTA AAGACTTTGT GGCTGAAGCT ATTCTTAAGC GCGAACCAAA AGTTGTCGGT 
ATTTACCGCT TAATCATGAA GGCGGGATCG GATAACTTCC GTGCTTCTTC TATTCAAGGC 
ATCATGAAGC GTATCAAGGC GAAAGGTGTT GAGGTCGTAG TTTACGAACC AGTGCTCAAA 
GAAGAAGATT TCTTTAACTC GCGCGTGATT GAAGACCTTA ATGAGTTTAA GCAAACGGCA 
GATGTGATCG TCTCTAACCG TATGGTTGAA GAGTTGGCAG ACGTTGCTGA TAAAGTTTAC 
ACGCGTGATT TATTTGGTAG CGACTAG
 
Protein sequence
MKIAVAGTGY VGLSNAMLLA QNHEVVALDI VPEKVELLNK QQSPIVDAEI EHFLENRELN 
FIATTDKQKA YKGAEYVVIA TPTDYDSVTH YFNTSSVEAV IKDVMSINPN AVMVIKSTVP 
VGYTARIKEE LGCENVIFSP EFLREGKALY DNLHPSRIIV GERSERAEVF AGLLVEGAVK 
DDIQVLFTDS TEAEAVKLFS NTYLAMRVAY FNELDSYAEA HGLDARQIIE GVGLDPRIGN 
HYNNPSFGYG GYCLPKDTKQ LLANYQDVPN NIIGAIVDAN RTRKDFVAEA ILKREPKVVG 
IYRLIMKAGS DNFRASSIQG IMKRIKAKGV EVVVYEPVLK EEDFFNSRVI EDLNEFKQTA 
DVIVSNRMVE ELADVADKVY TRDLFGSD