Gene VIBHAR_00653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00653 
SymbolradC 
ID5555835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp642164 
End bp642838 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content46% 
IMG OID640906148 
ProductDNA repair protein RadC 
Protein accessionYP_001443882 
Protein GI156972975 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGA AAACCTTGCC TAACGAGTCC ATGCCAAGAG AGAAATTGCT GCAACGCGGT 
CCGCAAGCGC TATCGGATGC GGAGTTACTT GCAATTTTCC TACGTACAGG CACGCAAGGC 
ATGAACGTAA TAGAGCTTTC TGACTTTCTT ATTCAAGACT TTGGATCACT GCGCCAGCTG 
TTCTCTGCCT CAGAGAAAGA GTTTTGCCAG CATAAAGGGT TAGGGCAAGC GAAATACGTG 
CAGTTACAAG CTGTTTTGGA AATGACGCAA CGCTATTTAG CCGAGACATT AAAACGTGGT 
GACGCGTTAA CCAGCCCAGA ACAAACCAAA CTTTATCTTT CCTCTATATT AAGAGACCGT 
CAAAGAGAGG CTTTTTACAT TCTTTTCTTA GATAACCAAC ATCGGGTGAT AAAAGATGAG 
ATTTTATTCG AAGGTACACT CGATGCTGCA TCGGTTTATC CGAGAGAAGT CGTCAAACGC 
GCCTTACACC ACAACGCTGC TGCATTGATT CTGGCCCACA ACCACCCGTC AGGTGTAGCG 
GAGCCGAGCC AAGCAGACAG AAGGATTACC CGGCGTTTAA TCGACGCTTT GGGCCTAGTA 
GATATTCGAA TTTTGGACCA TTTCGTTATC GGAGATGGGG AAAGCGTCTC TTTTGCCGAA 
AGAGGTTGGA TATAA
 
Protein sequence
MTLKTLPNES MPREKLLQRG PQALSDAELL AIFLRTGTQG MNVIELSDFL IQDFGSLRQL 
FSASEKEFCQ HKGLGQAKYV QLQAVLEMTQ RYLAETLKRG DALTSPEQTK LYLSSILRDR 
QREAFYILFL DNQHRVIKDE ILFEGTLDAA SVYPREVVKR ALHHNAAALI LAHNHPSGVA 
EPSQADRRIT RRLIDALGLV DIRILDHFVI GDGESVSFAE RGWI