Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00555 |
Symbol | |
ID | 5553055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 536679 |
End bp | 537413 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640906050 |
Product | hypothetical protein |
Protein accession | YP_001443785 |
Protein GI | 156972878 |
COG category | [S] Function unknown |
COG ID | [COG4315] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACTCGT TAATAAGGAA AACGACTGTG AAAAAACTAT TATTTTCGGC ATTACTGGTC ACCTCAACTA GTTTTGCTGC GCCAACAACA ACTACGTCAG TTGGAGAGGT ATACACCGAT GCCTCAGGCA AATCACTTTA TACCTTTAGC AAAGATCCAG TTGGGAAATC TGTATGTACT GACCAATGTG AGAAGTTATG GCCGCCTGTT CTTGTAACCG CACAATCCAG CAAGCACTTC GGTACGCAAG CAGGCTTCAG CCAAATAACA AGAGAAGACG GCAACAAACA ATGGGCTTTG AACGGAAAAC CACTTTATCG CTGGCTTAAA GACTCTCAGA AAGGAGAGAT CACAGGTGCG GGCATCAAAG GCGTTTGGCC ACTAGCCCGA GCGGATGATG TCACCATCAG ACTGTTCAAT GATGGTAAGC AACGTTATCT GGTCGATAGC CATAATAAGA CTCTCTATAA CTTTGATAAA GATAAGCCAA ACCAATCCGT TTGCTACGAT GATTGCGCCT CTAAGTGGCC ACCTGCTCTT GTGGATACAG AGATAACTCA AAAGGGGATA GAAAATCTAA AGCTGACGGG AGGATTTGGT GTGACTCAGC GCAACGACGA CTCATATCAA TGGACATATC ACAACAAACC GCTTTATCGT TGGATAAAAG ACCAAAAGCT CGGTGACACT AGCGGGAATG GCGTAAAACA AGTCTGGCAC ATTGTAGAAC AATAA
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Protein sequence | MDSLIRKTTV KKLLFSALLV TSTSFAAPTT TTSVGEVYTD ASGKSLYTFS KDPVGKSVCT DQCEKLWPPV LVTAQSSKHF GTQAGFSQIT REDGNKQWAL NGKPLYRWLK DSQKGEITGA GIKGVWPLAR ADDVTIRLFN DGKQRYLVDS HNKTLYNFDK DKPNQSVCYD DCASKWPPAL VDTEITQKGI ENLKLTGGFG VTQRNDDSYQ WTYHNKPLYR WIKDQKLGDT SGNGVKQVWH IVEQ
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