Gene VIBHAR_00543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00543 
Symbol 
ID5556293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp522122 
End bp524701 
Gene Length2580 bp 
Protein Length859 aa 
Translation table11 
GC content47% 
IMG OID640906038 
Producthypothetical protein 
Protein accessionYP_001443773 
Protein GI156972866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATG AATTCGGGTT GATAGAGGGC AACTTCCACA ACCTTTCGGA AGCAGATGTC 
GTCTCTGCTA TTCCTGCTCA TCTTACCTTT GAGCAGCTAA AACAACACCT CCACGAGGGT
AAGCTCGTAC TTGTGAGTGA TACACCTCAA ATTCCCGCAC TTCTGAGTTA CAACGACCCA
ATTGGTCCTA AAACATGGCG CCTAAACTCT GAGGTTATCT CTGCATTTTC GGATGATGCG
ACTAAGGAGT TGTTAGCAAA GACTAAAATC CCCAGAGTAA CGGGAGGGTA CAGCACACGT
ATTGTAGAGA CCGCGACACT CGAACGAGCT TACACGCCGC AGCCAATAGC AACCGAAAGT
GAAGAGGAAA TCACCAAGGA ATTCGAGTAC AGCTTCGAAG TTGGCTGCTC GGATGCCACC
ATAAAGAAAA TGGTGCACAG TGACTTTGCT TTAGCGAAAA CTGAAAAAGA GAACGCGGTG
ACTCGCTGGG AACAAACCAA AACCGAGCAA GGCACCCGCT ACACAGCGTT ATGTGTGTTT
GATGAGCCAA AGCGTTTAAA TATCCATATT GCTGATGACA ACCTCGGGCT GACACCACTT
GAAGCCATCA CACTACAAAA AGCTGGCAGC CATAAAACTG AGGAAGGTTT TATACCTGTT
GTTCCGGCTG TGCGATTGGG CGAACGCCTA GGCTTGCCGA CAGAAGGCTA TTACTACCAC
TTAAATGATG GTGAACTGGT CCAAGAGTAC AAAATTCTCG GACAAGAAAA ATGGGCGTTT
TACGCTACGC GATCGACACA AGACAAGCTC AATGATGAGC GTGGTTTTAC CAAAGACCAA
AGCGCTATAT TGGTGTATTG GAAGTTGGCC AACCAAGTCC TTGAGAACCA ATACATCATT
TATCTTGAGC GCCAAATCAC ACGAGAAGAG CTCGATAACC TCAGTGAAGA TTGGCTGAGT
GAAAACGGGA TAAAGTTGGA TATTCCTGCA CTGTTTGATG TAGCTAAACA GCCGGAAGAA
GCACGCGTAG AAGATAACAA CGATGAGACG GAAGCAGAAC AAACCGCAGC AACGCACATC
GTAGTTGCAG GGGAAACCTG GCAGAGCATC GCTGAACGGT ATGGTATGGG AGCGAAAGCC
TTGCTCTCGC TTAACCCAGT GTTTGAGGCC GACCCTCTAT CACTCACAAT TGGTGATGAA
ATTGTTGTTG CAGAAGCACA GCAAAAACAA ACACCGGACA AAAAGAACAC TTTTCCGCCT
CTGCGCCCGC AAACCTACAA CAACATCCGC AACAGTCATT ACCAACACAG CGATCCATTG
CTTGGGTTGA CCAAATACCG AGCCATCAAC GCCGCTGATT TCGTCGAAGG TGATGTCGCC
ATCCTTAACT TAAAAGACGC CACAAGCTCG CTCGTGTTCG CTAAATCCTG CACCAGGCCA
GAAGGGTGTA TTGAAATTGG TGACCAACAA GAGTCAATCA GTAACTTCGG GCCTTGGTCA
TTCTTTTTTG CACAAGCGAA TGCGACCCCA GCAGCTGTCA TACCCGCCAT TCAAGCAACA
CAAGCACAAA TGGCCATGGG AAGTTCCGCA GCTGTCGCCG GCTCACCAGA GCAAACGCAG
CAAACCCAAA CTGCGGCGAT GCAGTTGGAT AAACTGGCAG GAACATTGAA AGACAAAATC
GTTGAGGGCT ACCGCTGGCA AGTAGAAGGC ATTGGCGCCT TGTTTGCCAT GCAGCAAAAC
TTATTTGGCG ATAACACCCA ATACACAGAC CAAGATTTGC GCCAAGTGAC CACGGCGCAA
AGCCGCGTTC GTGTCCACAT TACCGAGCCC CAAGATGGAG AGTTTTACCC GCACGTGCAG
GGCTATCATG TAGACGACAC GCGTATCCCC ATCAAATACG TGAAACAGGG AAATAATGGC
CAACTGTCCG TTGCGATTGA AGATAACGGA CCAACCATCT ATTGGACACC AGAAGAAAAC
GGTGAAGCAA GTTGGCAAAC TACTCCCGAT CATAGTGATG ACTTTGAAAA AGAAGATATA
CTCGTCACGC CAATCCACTC GGATGGCGAT GCGAACGTCA CCGTTACGCC TGCGCCGGAA
GAGAAAGACT GGCGTGATGC GATCTTGGTA TTCCCGGAAA GCTCAGGTAT TGCACCGCTC
TATGTGGTTT ACAAAGAAAG CCCGAGGGAT AAGCCCGGAG TCGTTACCGG GAAAGGCGAA
GATATCTTTG GCATTTGGTT GGCAGGTGCA GGTAAGGACT TAGGAGCCCC AATACCGTCT
CAAATTGCAG ATAAGCTGAG AGGAAAAGAA TTCAGCAGCT TTGATGCGTT TCGAAAAGCA
TTCTGGTTAG AGGTATCTAA AGACAGCGAT TTAAAGGGAC AATTTAATGC ACAAAACCAA
ATTCGAATCG GGTTAGGGAA GGCTCCTAAA GCAAGAAGTC GAGATAAAGT AGGAAAGAGA
AAATCTTTTG AGCTACATCA TGTAGATGAA GTGCAGAATG GTGGCAAGGT TTACGATTTA
GATAATTTAA AAGTGACCAC ACCCAAAAAT CATATTGATA TTCATAGAGG TATGAAGTGA
 
Protein sequence
MSHEFGLIEG NFHNLSEADV VSAIPAHLTF EQLKQHLHEG KLVLVSDTPQ IPALLSYNDP 
IGPKTWRLNS EVISAFSDDA TKELLAKTKI PRVTGGYSTR IVETATLERA YTPQPIATES
EEEITKEFEY SFEVGCSDAT IKKMVHSDFA LAKTEKENAV TRWEQTKTEQ GTRYTALCVF
DEPKRLNIHI ADDNLGLTPL EAITLQKAGS HKTEEGFIPV VPAVRLGERL GLPTEGYYYH
LNDGELVQEY KILGQEKWAF YATRSTQDKL NDERGFTKDQ SAILVYWKLA NQVLENQYII
YLERQITREE LDNLSEDWLS ENGIKLDIPA LFDVAKQPEE ARVEDNNDET EAEQTAATHI
VVAGETWQSI AERYGMGAKA LLSLNPVFEA DPLSLTIGDE IVVAEAQQKQ TPDKKNTFPP
LRPQTYNNIR NSHYQHSDPL LGLTKYRAIN AADFVEGDVA ILNLKDATSS LVFAKSCTRP
EGCIEIGDQQ ESISNFGPWS FFFAQANATP AAVIPAIQAT QAQMAMGSSA AVAGSPEQTQ
QTQTAAMQLD KLAGTLKDKI VEGYRWQVEG IGALFAMQQN LFGDNTQYTD QDLRQVTTAQ
SRVRVHITEP QDGEFYPHVQ GYHVDDTRIP IKYVKQGNNG QLSVAIEDNG PTIYWTPEEN
GEASWQTTPD HSDDFEKEDI LVTPIHSDGD ANVTVTPAPE EKDWRDAILV FPESSGIAPL
YVVYKESPRD KPGVVTGKGE DIFGIWLAGA GKDLGAPIPS QIADKLRGKE FSSFDAFRKA
FWLEVSKDSD LKGQFNAQNQ IRIGLGKAPK ARSRDKVGKR KSFELHHVDE VQNGGKVYDL
DNLKVTTPKN HIDIHRGMK