Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00336 |
Symbol | rho |
ID | 5555774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 321391 |
End bp | 322650 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640905830 |
Product | transcription termination factor Rho |
Protein accession | YP_001443585 |
Protein GI | 156972678 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTTA CTGAACTGAA GAACAGACCT GTGTCTGACC TTGTAAAGCT TGGCGAAAGC CTGGGTCTTG AGAACCTAGC TCGTCTAAGA AAACAAGACA TCATCTTCGC AATTCTTAAA GCGCACGCGA AAGGCGGCGA AGACATCTTT GGCGATGGGG TTCTGGAGAT TCTGCAAGAC GGCTTTGGTT TCCTACGTAG CGCGGACAGC TCATACCTTG CTGGTCCAGA CGACATCTAC GTTTCGCCAA GTCAGATTCG TCGCTTCAAC CTACGTACTG GTGACTCAAT TGCTGGTAAA ATTCGCCCAC CAAAAGACGG TGAGCGTTAC TTTGCTCTGC TAAAAGTCAA CACAGTAAAC GACGACAAAC CAGACAACGC TCGTAACAAG ATCCTATTCG AGAACTTAAC GCCTCTACAC GCTAACGAGC GTATGGTTAT GGAGCGCGGT AACGGTTCTA CAGAAGACAT CACAGCACGT GTTTTAGACT TGGCATCGCC AATTGGTAAA GGTCAACGTG GTCTGATTGT TGCTCCGCCT AAAGCGGGTA AGACAATGCT TCTGCAAAAC ATCGCTCAAA GCATCGCATA CAACCACCCA GAGTGTGAGT TGATGGTACT TCTTATCGAC GAACGTCCTG AAGAAGTAAC AGAGATGCAG CGTCTAGTTA AAGGTGAAGT AGTAGCGTCA ACGTTCGATG AGCCAGCTTC TCGTCACGTA CAAGTAGCGG AAATGGTAAT CGAGAAAGCA AAACGTCTTG TTGAACACAA GAAAGACGTG GTTATCCTGC TTGACTCTAT CACTCGTCTA GCTCGTGCAT ACAACACTGT AGTGCCTTCA TCAGGTAAAG TACTAACTGG TGGTGTGGAT GCAAACGCAC TACACCGTCC TAAGCGTTTC TTCGGTGCTG CGCGTAACGT AGAAGAAGGC GGCAGCCTAA CTATCCTTGC TACGGCTCTA GTCGATACTG GTTCTAAGAT GGACGAAGTT ATCTACGAAG AATTCAAGGG TACAGGTAAC ATGGAAATCC ACTTGAACCG TAAGATTGCA GAGAAACGTG TATTCCCTGC GATTGACTTC AACCGCAGTG GCACACGTCG TGAAGAGCTT CTAACTAAGA ACGAAGAACT TCAGAAGATG TGGATTCTAC GTAAGATCGT TCACCCAATG GGCGAAACTG ACGCGATGGA GTTCCTAATC GACAAGCTAG CGATGACGAA GACCAACGAC GAGTTCTTCG ATGCAATGCG TCGTCAATAG
|
Protein sequence | MNLTELKNRP VSDLVKLGES LGLENLARLR KQDIIFAILK AHAKGGEDIF GDGVLEILQD GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDSIAGK IRPPKDGERY FALLKVNTVN DDKPDNARNK ILFENLTPLH ANERMVMERG NGSTEDITAR VLDLASPIGK GQRGLIVAPP KAGKTMLLQN IAQSIAYNHP ECELMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD ANALHRPKRF FGAARNVEEG GSLTILATAL VDTGSKMDEV IYEEFKGTGN MEIHLNRKIA EKRVFPAIDF NRSGTRREEL LTKNEELQKM WILRKIVHPM GETDAMEFLI DKLAMTKTND EFFDAMRRQ
|
| |