Gene VIBHAR_00316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00316 
Symbol 
ID5555476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp304621 
End bp305802 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content45% 
IMG OID640905811 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_001443571 
Protein GI156972664 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2959] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTA AAAATAACGA CCAAAAGAAT AACGATAAAA ACCTTTCCGA AGAAACCACA 
TCGGCACCGC TAGCTGAAAA AGACACGCCT AAGAAGGAAT CTGAGCCAAC CAAGCCAGAA
CAACCAAACA AAGTTGAATT TGAAGAGAAG CAAGGCAAAC GCGGCGTCAA GCTGGGTACT
GTCGCTATCG TCTTATCACT GATTTTTGGT GGCGGTCTCA CTTACAAAAT GCTTGAGCAG
CAATCTGAAT ACCAAACTCA GATCGCTCAT CTGCAAAGCC AACTGGAGCA AGCTCAATCA
GCAATGAAGC AAGAGCTTAG CCAAGTAAAA GAAGAAACCA TTGAAAAAGC GACCACAGTC
ACTCACAAAG CAGAAGTGGT ACTGGGTCAG CAACAAAAGA GCATCGAAAG CCTGCAACTG
GCAGTCGCTG ATGTGAAAGG TCGTCGTCCA AACGACTGGT TACTGGCAGA AGCTGACTAC
CTAGTAAAAC TGGCAGGTCG TAAATTGTTC TTAGAGCACG ATGTAGAAAG TGCTACTCAA
TTGATGGAAA GCGCGGATCA ACGTATCGCA GCGCTGAACG ACCCAAGCTT GGTCGGTCTG
CGTAAAGCCA TGGCAAACGA CATTACTAAG CTGCGTGTTG TTCCTTTAGT AGACCGTGAT
GGCTTGGTAT TACGCCTCAC TGCACTACAA CAGCAAGTAG ACAAACTGCC ACTTGCGAAT
GCTTTACTAC CTGAAGCAGC TGCGGTAGAG AAACAACAAG TGTCTGAAGA CATTGCAAAC
TGGCAAGATA ACCTGATGAC GTCACTAAAA GACTTCTCAG AAAATTTCAT CACCTTCCGC
ACTCGTGACG GCAACGTAAT CCCTCTATTG TCACCACAAC AACACTTCTA CTTGAAAGAA
AACATCAAAG CGAAGTTAGA GACGGCAATT AAAGCGGTTT ACCAAGAGCA AGGTGAAATC
TACACCACCT CTTTGGAAAC GGCAGACAAG TGGGCAATGG CATTCTTCAA CCAAGACGAC
AACTCGGTGA AAGAATTCAA CAAAACACTG AGTCAACTGA GCAAGCAAGA CATTCAAGTT
GAATACCCTG CGAAGCTAGA AAGCCAAAAC CAACTCTCTG ACGTGATTCG TGAACGCCTA
CGTCGTGAAG TGACCACAAT GACAGGTACG GAGGATAAGT AA
 
Protein sequence
MTSKNNDQKN NDKNLSEETT SAPLAEKDTP KKESEPTKPE QPNKVEFEEK QGKRGVKLGT 
VAIVLSLIFG GGLTYKMLEQ QSEYQTQIAH LQSQLEQAQS AMKQELSQVK EETIEKATTV
THKAEVVLGQ QQKSIESLQL AVADVKGRRP NDWLLAEADY LVKLAGRKLF LEHDVESATQ
LMESADQRIA ALNDPSLVGL RKAMANDITK LRVVPLVDRD GLVLRLTALQ QQVDKLPLAN
ALLPEAAAVE KQQVSEDIAN WQDNLMTSLK DFSENFITFR TRDGNVIPLL SPQQHFYLKE
NIKAKLETAI KAVYQEQGEI YTTSLETADK WAMAFFNQDD NSVKEFNKTL SQLSKQDIQV
EYPAKLESQN QLSDVIRERL RREVTTMTGT EDK