| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00315 |
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| Symbol | hemD |
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| ID | 5555452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 303875 |
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| End bp | 304603 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640905810 |
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| Product | uroporphyrinogen-III synthase |
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| Protein accession | YP_001443570 |
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| Protein GI | 156972663 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTGT TGGTCACTCG TCCGGGAGAG CAAGGCGCGG CGCTTTGCTC TCTGCTCGAA
AGGCACGGCA AAACTGCAAT TCATCATCCT CTGATCGACA TCGTCGCCGA TCTCAGCGAC
ACACAACTCT CCAAATACAT TGAAACCGCT CAAATCATTA TTGCTGTTAG CCAGCATGCG
GTGCAATGCG CGGAGCAAAT CTTGCAGAAC CACGCTAAAT CATGGTCTAA GCAGGCTGTA
TACCTTGCCG TTGGTCAAAA AACAGCACAC TATTTAAGCA AATGTACCCA ACAAAAAGTA
CACTATCCAC AAGTCAGTGA TAGTGAGCAC TTGTTGCAGC TACCCGAGCT AAACAATGTA
GAAAAACAAA CAGTTCTGAT CCTCCGTGGC AACGGCGGTA GAGAGCTGAT AAAAGATGCA
TTGGTGAGAC GTGGAGCAAA AGTTCACTAT AGTGAGACTT ATAAGAGAGA ATTTATCCCA
TTCGATCCAG TAAGCTGTGT CTCACTATGG AAAACCCAAC AAATCGACCA GATTATCGTC
ACCAGTGGTG AACAACTGGA TTATTTGTGC AGCCAATTGA CGTCAGAGCA ATTGACTTGG
CTTAATCAAC AAGAGTTGTA TATCCCCAGT CAGCGAATCG CTGACATCGC AATTCAACGG
GGCTTCACTC AGGTCAGGTG CACAGGAAGC GCATCCAACC AAGAATTACT GGCTGCTCTC
CAGCCCTAG
|
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| Protein sequence | MAVLVTRPGE QGAALCSLLE RHGKTAIHHP LIDIVADLSD TQLSKYIETA QIIIAVSQHA
VQCAEQILQN HAKSWSKQAV YLAVGQKTAH YLSKCTQQKV HYPQVSDSEH LLQLPELNNV
EKQTVLILRG NGGRELIKDA LVRRGAKVHY SETYKREFIP FDPVSCVSLW KTQQIDQIIV
TSGEQLDYLC SQLTSEQLTW LNQQELYIPS QRIADIAIQR GFTQVRCTGS ASNQELLAAL
QP
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