Gene VIBHAR_00300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00300 
Symbol 
ID5555166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp287522 
End bp288511 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID640905795 
Productlysophospholipase 
Protein accessionYP_001443555 
Protein GI156972648 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA ACCATTCACC TTTGACTTAT ACTCAAGAGA CTTTATTTGA GCAAGCAATA 
GGTGGTCCGA TCGCAGCACT TTGGCAAGAG CGCCAAGAAG GCTTTGTAAA AGGGACAGAG
AAAAAGAAAA TCTACTGGTG CAGACTTACC AATCCTGAGC ACACAAAAGC CGTGCTGATC
GTCAACGGTC GCATTGAAGC TTCCTGGAAA TACCAAGAAC TGTTCTATGA CCTATATCGA
CAAGGTTATG ACGTGTATTC GTTTGACCAT CGAGGACAAG GTTTATCAGA TCGCCTAATT
CCAGACTCAG ACATGGGTCA CGTCTATGAC TTTAATGACT ACATTGAAGA TATGGAATTG
GTGCTGCAAC AGCTTGATTT AAGCGGATAC CAACAGCGTT TTATCATTGC TCACTCAATG
GGTGGCGCAA TCGCTACGCG CTACCTGCAA ACGCATCCAG AACACAACTT TGATGGTTTG
ATTCTGAGTT CCCCAATGTT TGGTATCAAC CTACCTTGGT ATCTCAGCCC TATCGCGATT
CCGGTCAGCC AAATCTTAGC GGCAGTCTCG ACAAAGCCAA GCTACGCGCC GGGTCATAAA
GAATACTACC CAAAACCGTT TGAAGATAAC CCACTTAGCC AAAGCTACGA TCGTTATCAT
TGGTTCCGTG GTTTATACCG TGACAAACCC GAGCTGCAAG TCGGTGGGCC AAGCACCCGC
TGGGTTTGGC AAGGTTTAAT GGCTGCCAAG CAATGCATTT TGCTGACTCG CCAAATTAAA
GTTCCGGTTT TATTGGTTCA GTCAGGCAAC GATCGCATCG TGAGTAACGC CGCGCAGCAA
CGCTTTATCG ATAAGCTAAG TAAGACCAAC CCTAATGCCA GCCTAGTTTC GATTGCTGGT
GCAGAGCACG AAATTTTGTT CGAAAAAGAC CAGTATCGTA ACCAAGCTCT GGACGCTATC
TTTTCCTTTA TGCGTGCTCA AAGCGCATAA
 
Protein sequence
MAINHSPLTY TQETLFEQAI GGPIAALWQE RQEGFVKGTE KKKIYWCRLT NPEHTKAVLI 
VNGRIEASWK YQELFYDLYR QGYDVYSFDH RGQGLSDRLI PDSDMGHVYD FNDYIEDMEL
VLQQLDLSGY QQRFIIAHSM GGAIATRYLQ THPEHNFDGL ILSSPMFGIN LPWYLSPIAI
PVSQILAAVS TKPSYAPGHK EYYPKPFEDN PLSQSYDRYH WFRGLYRDKP ELQVGGPSTR
WVWQGLMAAK QCILLTRQIK VPVLLVQSGN DRIVSNAAQQ RFIDKLSKTN PNASLVSIAG
AEHEILFEKD QYRNQALDAI FSFMRAQSA