| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00256 |
|---|
| Symbol | |
|---|
| ID | 5555611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 249627 |
|---|
| End bp | 250433 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640905752 |
|---|
| Product | glutamate racemase |
|---|
| Protein accession | YP_001443512 |
|---|
| Protein GI | 156972605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0796] Glutamate racemase |
|---|
| TIGRFAM ID | [TIGR00067] glutamate racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAGCAT CAAGTAAGAA AAAAGTCCTA GTGTTTGATT CCGGTGTCGG AGGATTATCG
GTCTTCCAAG AAATCCACCG ACTTCTGCCA CATATGGATT ACTTGTATCT GTTCGATAAC
GAAGCCTATC CGTATGGTGA ACTCGATCAA GATGTGCTGA TTACTCGCGT TAATAAGCTG
GTGGCAGCGT TGGTCGAAGA GCATCAAGCT GACATCGTGG TCATCGCCTG CAATACCGCA
AGTACCATAG TGCTGCCATC ACTGCGTGCT AATCTATCAA TCCCAGTTGT TGGTGTAGTT
CCTGCGATAA AGCCTGCATC ACTACTTGCT TCTCAAGGCG TTGGGTTAAT TGCTACGCCA
GCGACAGTGA CTCGTCAATA TACCCATGAA CTGATTCGCG ACTTTGCCCA AGGTAAACCT
GTCGAGTTAT TAGGCTCGAC TCGCTTAGTG GATATGGCAG AAGAAAAGCT GCGTGGTGAA
AGTATTTCTC TTTCAGAGCT GGAAAGCATT CTTCTCCCAC TGCGTAATAA AGTAGATGTC
GCAGTACTGG GTTGTACTCA CTTCCCTCTA ATCAAAGAAG AAATACATCA AGCATTGGGT
GGTGAAGTAA CGTTAGTTGA TTCGGGTGAA GCCATTGCGC GTCGTGTGAA AGCATTATTG
CTTAATGCCA TGAAGCAAGA GAGTAGAGAA GAGGGGAGTA AGAAGATTTA TGCCAGTGCA
CCTCCTTGGC AAGAAGATGC ACTGAATACC TGTTTGGCGA ACTTAGGCTT TAATCCTGTT
CAGGTTTACC GCCTTCCGGG TGTTTAG
|
|---|
| Protein sequence | MRASSKKKVL VFDSGVGGLS VFQEIHRLLP HMDYLYLFDN EAYPYGELDQ DVLITRVNKL
VAALVEEHQA DIVVIACNTA STIVLPSLRA NLSIPVVGVV PAIKPASLLA SQGVGLIATP
ATVTRQYTHE LIRDFAQGKP VELLGSTRLV DMAEEKLRGE SISLSELESI LLPLRNKVDV
AVLGCTHFPL IKEEIHQALG GEVTLVDSGE AIARRVKALL LNAMKQESRE EGSKKIYASA
PPWQEDALNT CLANLGFNPV QVYRLPGV
|
|---|
| |