Gene VIBHAR_00227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00227 
SymbolrplJ 
ID5554617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp231021 
End bp231557 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID640905723 
Product50S ribosomal protein L10 
Protein accessionYP_001443494 
Protein GI156972587 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTGA GTGGTGTAAC GACAACCAGG AGTAAATCCA AGATGGCTTT AAACCTTCAA 
GACAAAAAAG CAATTGTTGC TGAAGTCAAC GAAGCTGCCA GTGGTGCACT TTCTGCAGTT 
GTAGCTGATT CTCGTGGCGT TGAAGTTGGC GCGATGACTT CTCTACGTAA ACAAGCTCGC 
GAAGCGGGTG TTTACATGAA AGTCGTGCGT AACACTCTAG CACGTCGTGC GGTTCAGGGT 
ACAGACTACG AGTGTCTAAC TGACACTTTC ACTGGTCCTA CTCTAATCGC GTTCTCTAAC 
GAGCACCCTG GTGCTGCAGC GCGTCTTTTC AAAGACTTCG CTAAAGAGAA CAAAGATTTC 
GAGATCAAAG CTGCTGCATT TGAAGGCGCT GTAACTGACG CTGAAGTACT AGCAACACTA 
CCAACTTACG ACGAAGCAAT CGCACGCCTA ATGATGTGCA TGAAAGAAGC TTCTGCTGGC 
AAGCTGGTAC GTACTATCGC TGCTATCCGC GATCAAAAAG AAGAAGCAGC GGCTTAA
 
Protein sequence
MIVSGVTTTR SKSKMALNLQ DKKAIVAEVN EAASGALSAV VADSRGVEVG AMTSLRKQAR 
EAGVYMKVVR NTLARRAVQG TDYECLTDTF TGPTLIAFSN EHPGAAARLF KDFAKENKDF 
EIKAAAFEGA VTDAEVLATL PTYDEAIARL MMCMKEASAG KLVRTIAAIR DQKEEAAA