| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00164 |
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| Symbol | |
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| ID | 5555242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 164029 |
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| End bp | 167562 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640905660 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_001443439 |
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| Protein GI | 156972532 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCAG TGTTAAATGA AACCTCTCCC TTATGGAGAG GTTTTTTTAT TCCTTGCTTT
AAAAACAGCA AGAAAAGCAA GAAAAGTAAG AAAGGATATC GGATGCAAGG ATGGCTAGTG
ATTCCCGTTT CTTTGGCGTA TTTGGGAATC CTGTTTTTAA TCGCTTGGTA CGGTGACAAA
CAAAAGAGAT GGCTAGCGCG TTGGCGACCA TGGATCTACA GTTTGTCGAT TGCAGTGTAC
TGTACATCGT GGACCTTTTA CGGCACGGTC GGACAGGCGA GCAACAACCC TTGGTCCTTC
TTACCCATCT ATATTGCGCC GATCATCGTG TTTACCATCG GTTGGCGCGT CCTCGCTCGG
CTTATCTTGA TTGCCAAGCG CGAGCACATC ACCTCGATTG CCGATTTCAT TGCCGCCCGC
TATGGCAAAT CACAAGGCTT GGCGGTGGTT GTCACCTTAA TCGCGGTGGC AGGCATTCTT
CCGTATATCG CTTTGCAACT GCGTGGCATC ACCATGGGGT TGGAGATCAT CGCGCCAGAT
TTAGCATCTG ATCTCAGTTA TCAAAACTAC AGCGTATCTT GGTTTGTGGT GGGGGCGATG
GCGATCTTCA CCATGTTGTT TGGTACGCGT CATATCGATA ACACCGAACA TCACCGCGGC
ATGATGATGG CGATAGCGTT TGAATCAGTA CTCAAGCTGG TGGCGTTTTT AGTGGTGGGC
GTGTTTATTG TTTGGCTCGC GATGGATACT GAGAGCTTCC ATCTCGCCGA TATTGCCGCT
GAAACCTATG AATCACCCAA TATTCCGACT TTGTTGATTC ATACCATTCT GACTATGCTG
GCGATTGTCT GTTTGCCACG TCAGTTCCAC ACCATGGTGG TCGAGAATGA ACGCGCGCAA
GACTTGCACG TCGCGCGTTG GTTGTTTCCA CTGTATCTGA TTCTGATGGG CATTTTCGTT
CTGCCAATCG CGTGGGTAGG GCAAAGTCTA CTGAGTGGTA GCCCTGCCGA TACGTACGTG
ATCAGTGTTC CGATGGCGGT GGGCGCGAAT GACATCGCCT TGCTGGCATT TTTGGGCGGT
ACTTCCGCGG CAAGTGGCAT GGTCATCGTC TCGACTATTG CCTTAGCGAT CATGGTATCG
AACGATTTGG TGATGCCGCT GATTCTGCGT CGGATGAAGT TATCAAAGCG TAATCATCAC
CATTTTTCTA CGCTGTTATT ACGTATACGT CGCGGACTTA TTCTACTTCT TTTGATTGGT
GCATGGGGCT TTTATCAGGC TTTAGATAGT ATCCACTCAC TCTCTGCGAT AGGTTTTCTC
TCGTTTGCTG CGATTACCCA GTTCGCCCCG TCTCTGCTTG GCGGTATGTA CTGGCGTCAG
GGCAACAAGA AAGGCGTGTA TGTTGGTTTG CTGGTGGGTT TCACCATTTG GTTGATTACT
TTGATGAGCC AAACCGACAT GCTGGCGGGC GATGCAACCA ACAACTTGCT GATTTGGCTG
ATCACGCCAC CAGATTTATT GGCAGGCTTT GATATTGCCG TTTCTGACTG GGGTATGATC
CTCAGCGTGG TGGCGAATGC TGCCTGTTTT TTTGCGGTAT CGCTAGCTAC GCGCCCAAGC
ATAAGTGAAC GCTTACAATC GGCTTCATTC GTTGGTACGC CGTTGCCTGA AAGTGAAAAC
ATCAGTTTGT ATCAGAGCCG TGTGACGGTC AGTGAGCTGG AGATGTTAGC GTCACGATTT
GTGGGGCGCA CGCGAGTGAA ATCCGCCTTC CAAACCTATT GGAGTCAGCA ACGCGAAGAG
CTGCTTCCCA ATCAACAAGC CCCCTCTACC TTAATTCGAC ACACCGAACG TGTACTTGCC
GGTGTGTTTG GTGCTTCTTC AGCTAAGTTA GTACTTACTT CTGCTTTACA AGGCAGAAAC
ATGCAGCTTG AGGAAGTGGC GACTATCGTT GATGAAGCCT CAGAACTGTA TGATTTCAGT
CGTGGCTTAC TGCAAGGGGC GATTGAACAC ATTGGACAAG GCATCGCAGT GGTCGACAAG
CAATTAAGGC TGGTAGCGTG GAACCAACGT TATCTGGAGT TGTTTGTCTT CCCGCCGGGG
TTGATTCAGG TCGGGCGTCC GATTGCGGAT GTGATTCGTC ATAATGCTGA GCAAGGTTTA
TGTGGTCCTG GTGACCCTGA AGATCACGTT CGTCGCCGTG TTTATCACCT TGAACAAGGC
ACGAGACATA CCTCTTCCCG TGTGCGTCCA GATGGTCGCG TAATTGAAGT GCAAGGCAAC
CCAATGCCTG GTGGTGGTTT CGTTATGAGC TTTACCGATA TCACCGTGTT CCGCGATGCA
GAGCAAGCTC TGAAAGACGC TAATGAGACA CTAGAAGAAC GCGTTCGTGC TCGTACTCGT
GAGTTGGAAC AACTGAACAA ACAGCTGGTG GCAGCGACGC AACGTTCTGA ACATGAGTCG
CAGTCTAAGT CGCGCTTCTT AGCCGCGGTG AGTCATGACT TGATGCAGCC GCTGAATGCC
GCACGACTGT TTGCTTCTTC GTTGTCGGAA GTGGCCAAAG ACAGTGAAAC CCAAAAGCTA
TCGACCCACA TTGAGAGTGC GTTGGGGGCG GCGGAAGATT TGATTGGTGA CTTGCTGGAT
ATTTCACGTT TGGAATCGGG CAAGTTGGAC GTCAATGTGC ATGGCTTTGC AGTCAATGAT
GTATTAGCTA ACTTGAATAC TGAATTCAGC GCACTGGCGA AACAACAAGG CATTGAGTTC
ACCATGATCC CATCGTCTTT GATGGTGAAA TCCGACCCGA AATTGCTGCG CCGCGTGGTA
CAGAACTTCC TTACCAATGC ATTCCGTTAT AGCCCGAGTG GTAAAGTAGC GCTTGGTGTG
CGTCGCGTAC AAGGCCGAGT ACGTATCGAT GTGTGGGATA ACGGCATGGG CATCGAAGAA
GAGAAGCAAC AAGAGATCTT CGAAGAATTT AATCGCGGTA CTCAAGTCCG TTCAGACCAA
GGTTTGGGGT TAGGTTTGGC TATTTCGAAA GGTATTGCTC AAGTACTAGG GCATGAAATC
TCGATGCGTT CTTGGTTCGG TAAAGGCAGT GTGTTCTCGA TTACCTTAGA TAAGGCAGAG
AAGGTGCACA TTCCGGCGCT CAAAGCGGTG AAGAGTGCAC AATCCGATTT AAGCCATATT
CGTGTCCTAT GTGTTGATAA CGAGCCGGAT ATTCTTGTTG GGATGGAAAA CTTACTCTCG
CGCTGGGGCT GCGACATTCG CATTGCGACT GATATTGTCG AGAGTCTTAA AACATTGGAA
GACGACTGGC TGCCGGATGT GATTTTCTCC GATTACCGTT TAGATAATGG TCGGACGGGA
TTGGAAGTGT TGCAGCAATG TCGTTTGCGT CTTGGGGACC GCTTTGAAGG GGTGATCATC
AGTGCCGATC GAACCGATGA CATGATGGAA GGCATTAAAG CCAATGGGTT CAGTTTTATC
GCCAAACCGG TGAAACCTTT GAAACTGCGC TCGGTACTCA ATCGAGTCGC CTAG
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| Protein sequence | MKAVLNETSP LWRGFFIPCF KNSKKSKKSK KGYRMQGWLV IPVSLAYLGI LFLIAWYGDK
QKRWLARWRP WIYSLSIAVY CTSWTFYGTV GQASNNPWSF LPIYIAPIIV FTIGWRVLAR
LILIAKREHI TSIADFIAAR YGKSQGLAVV VTLIAVAGIL PYIALQLRGI TMGLEIIAPD
LASDLSYQNY SVSWFVVGAM AIFTMLFGTR HIDNTEHHRG MMMAIAFESV LKLVAFLVVG
VFIVWLAMDT ESFHLADIAA ETYESPNIPT LLIHTILTML AIVCLPRQFH TMVVENERAQ
DLHVARWLFP LYLILMGIFV LPIAWVGQSL LSGSPADTYV ISVPMAVGAN DIALLAFLGG
TSAASGMVIV STIALAIMVS NDLVMPLILR RMKLSKRNHH HFSTLLLRIR RGLILLLLIG
AWGFYQALDS IHSLSAIGFL SFAAITQFAP SLLGGMYWRQ GNKKGVYVGL LVGFTIWLIT
LMSQTDMLAG DATNNLLIWL ITPPDLLAGF DIAVSDWGMI LSVVANAACF FAVSLATRPS
ISERLQSASF VGTPLPESEN ISLYQSRVTV SELEMLASRF VGRTRVKSAF QTYWSQQREE
LLPNQQAPST LIRHTERVLA GVFGASSAKL VLTSALQGRN MQLEEVATIV DEASELYDFS
RGLLQGAIEH IGQGIAVVDK QLRLVAWNQR YLELFVFPPG LIQVGRPIAD VIRHNAEQGL
CGPGDPEDHV RRRVYHLEQG TRHTSSRVRP DGRVIEVQGN PMPGGGFVMS FTDITVFRDA
EQALKDANET LEERVRARTR ELEQLNKQLV AATQRSEHES QSKSRFLAAV SHDLMQPLNA
ARLFASSLSE VAKDSETQKL STHIESALGA AEDLIGDLLD ISRLESGKLD VNVHGFAVND
VLANLNTEFS ALAKQQGIEF TMIPSSLMVK SDPKLLRRVV QNFLTNAFRY SPSGKVALGV
RRVQGRVRID VWDNGMGIEE EKQQEIFEEF NRGTQVRSDQ GLGLGLAISK GIAQVLGHEI
SMRSWFGKGS VFSITLDKAE KVHIPALKAV KSAQSDLSHI RVLCVDNEPD ILVGMENLLS
RWGCDIRIAT DIVESLKTLE DDWLPDVIFS DYRLDNGRTG LEVLQQCRLR LGDRFEGVII
SADRTDDMME GIKANGFSFI AKPVKPLKLR SVLNRVA
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