| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00160 |
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| Symbol | |
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| ID | 5555178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 159668 |
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| End bp | 161395 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640905656 |
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| Product | sodium/solute symporter |
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| Protein accession | YP_001443435 |
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| Protein GI | 156972528 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGA AAACTATTAC CTATCTAGTG GTTGGCGCGA CATTCGTCCT CTACATCGGT
ATTGCAATTT GGGCTCGTGC AGGCTCAACC AAAGAATTCT ATGTAGCAGG TGGCGGTGTC
AACCCGATCG CTAACGGCAT GGCGACCGCA GCAGACTGGA TGTCAGCAGC TTCGTTCATC
TCAATGGCGG GCTTGATTGC CTTCATGGGT TACGGCGGTT CAGTATTCCT TATGGGCTGG
ACAGGCGGTT ACGTACTGCT TGCACTTCTA CTTGCCCCAT ATCTACGTAA GTTCGGTAAG
TTTACCGTGC CAGAATTCGT AGGTGAGCGT TTCTACTCTA ACGCAGCGCG TATCGTAGCG
GTTGTGTGTC TGATCATCGC ATCGGTGACT TACGTTATCG GTCAGATGAA AGGCGTAGGC
GTGGCGTTTG GTCGTTTCCT AGAAGTGGAT TACTCAACAG GTCTACTGAT CGGTATGTGT
ATCGTATTCA TGTACGCGGT TATGGGCGGC ATGAAAGGCA TTACCTACAC GCAGATTGCT
CAATATTGCG TACTCATTTT GGCTTACACT ATTCCTGCAA TATTTATCTC TCTGCAACTA
ACAGGTCACC CACTACCACA GATCGGTCTG GGTAGTACCA TCCAAGGCAC CGATGTCTAT
CTGCTCGATA GGCTCGACCA AGTGGTCACC GAGCTCGGCT TTAGTGAATA CACCACCCAA
GTTCGTGGCG ACACACTAAA CATGTTCGTG TACACCATGT CACTGATGAT CGGTACTGCG
GGTCTACCAC ACGTAATCAT CCGTTTCTTT ACTGTACCTA AGGTTCGTGA TGCTCGTACA
TCAGCAGGTT GGGCACTTGT GTTCATCGCT ATCCTTTACA CTACAGCACC TGCAGTATCT
GCAATGGCGA GTCTAAACCT AATGGATACC GTTAACCCAG CTCCTGGTCA GCACCTTGCT
TACGATGAGC GTCCTGACTG GTTCAAGAAC TGGGAGAAAA CAGGTCTACT AGGCTTTGAT
GACAAGAATG GCGACGGTCT AATTGAGTAC ACGTCAAACC CAGCAACCAA CGAGCTGAAA
GTTGACCGTG ACATCATGGT ATTGGCAAAC CCAGAGATTG CTAAACTACC TAACTGGGTA
ATCGCACTTG TCGCAGCAGG TGGTCTAGCG GCAGCGCTAT CGACGGCGGC AGGCCTACTA
CTAGCCATCT CGTCCGCAAT ATCCCATGAC TTAATCAAAG GTGTGATAAA TCCGAACATA
TCCGAGAAGA AAGAGCTACT CGCGAGTCGA ATCTCCATGG CAGTCGCCAT CGCAGTCGCC
GGTTACTTAG GCTTGAATCC GCCAGGGTTT GCCGCCGGTA CGGTAGCCCT CGCCTTCGGT
CTGGCAGCAT CTTCCATCTT CCCTGCGTTG ATGATGGGTA TCTTCAGTAA GAGCATCAAC
AAAGAAGGCG CAATCGCAGG TATGATTGCT GGTATCAGTA TCACGCTATT CTACGTGTTC
CAGCACAAAG GCATCTTGTT TGTATCTGAC TGGACTTACC TACAAAGCTG GGGTCAGAAC
TGGTTCCTAG GCATCGAGCC AAACGCATTT GGTGCAATTG GTGCGGTATT TAACTTTGTT
GTGGCGTTCG CTGTATCAAG AGTAACAGCA GAAACACCAC AAGAAGTAAA AGACCTTGTC
GAGCACGTAC GTGTACCAGC AGGCGCTGGC GGTGCGGTAG ACCACTAA
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| Protein sequence | MDLKTITYLV VGATFVLYIG IAIWARAGST KEFYVAGGGV NPIANGMATA ADWMSAASFI
SMAGLIAFMG YGGSVFLMGW TGGYVLLALL LAPYLRKFGK FTVPEFVGER FYSNAARIVA
VVCLIIASVT YVIGQMKGVG VAFGRFLEVD YSTGLLIGMC IVFMYAVMGG MKGITYTQIA
QYCVLILAYT IPAIFISLQL TGHPLPQIGL GSTIQGTDVY LLDRLDQVVT ELGFSEYTTQ
VRGDTLNMFV YTMSLMIGTA GLPHVIIRFF TVPKVRDART SAGWALVFIA ILYTTAPAVS
AMASLNLMDT VNPAPGQHLA YDERPDWFKN WEKTGLLGFD DKNGDGLIEY TSNPATNELK
VDRDIMVLAN PEIAKLPNWV IALVAAGGLA AALSTAAGLL LAISSAISHD LIKGVINPNI
SEKKELLASR ISMAVAIAVA GYLGLNPPGF AAGTVALAFG LAASSIFPAL MMGIFSKSIN
KEGAIAGMIA GISITLFYVF QHKGILFVSD WTYLQSWGQN WFLGIEPNAF GAIGAVFNFV
VAFAVSRVTA ETPQEVKDLV EHVRVPAGAG GAVDH
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