Gene VIBHAR_00158 details

Gene Information

• Locus tag: VIBHAR_00158
• ID: 5555153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 158565
• End bp: 159191
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640905654
• Product: multiple antibiotic transporter
• Protein accession: YP_001443433
• Protein GI: 156972526
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2095] Multiple antibiotic transporter
• TIGRFAM ID: [TIGR00427] membrane protein, MarC family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTAAGTA TTCTCGTCAC TCAATTCGTC GTTCTCTGGG CCGTCATCGA CCCGATTGGT 
TCAGTACCCG TTTACCTATC ACAAACTCAA CACCTTACGG CAAAACAGCG TCGTCTCGTC 
GCGTTAAAAG CGATTGCCAT TTCGATGGGT GTATTGCTGT TCTTTCTTAT TGCCGGTCAG 
TTGTTACTGG AAGCAATGCA AATCCCATTA CCTGCCTTTC AAGCCGCTGG TGGTTTAGTG 
CTATTGCTAT TTGCACTGTC GATGATCTTT GGTGAGAGCA AACCAGAACA AGAACAAAAG 
CTGGGTGAAG AAGTCAGCCA CTCCGATCTC GCTGACTTAG CCGTTTACCC TCTTGCTATC 
CCTTCAATTG CGTCACCGGG AGCAATGATG GCCATCGTGA TGCTCACCGA TAACAACCGC 
TACTCTTTTG TCGACCAGGC GATGACCGCA GGCGTCATGA TGGCAGTCCT TCTGGTTACC 
CTATTCTTGT TACTGGGTGC AAATACGATT CAAAAAGTGA TTGGTAATGT AGGCGCAGCC 
ATCATCAGCC GCGTAATGGG ACTTATCCTT GCCGCTGTTG CACTGAATAA TTTGCTGCTT 
GGTATAAAAG ATTTCTATGT TAATTGA 

 

Protein sequence

MLSILVTQFV VLWAVIDPIG SVPVYLSQTQ HLTAKQRRLV ALKAIAISMG VLLFFLIAGQ 
LLLEAMQIPL PAFQAAGGLV LLLFALSMIF GESKPEQEQK LGEEVSHSDL ADLAVYPLAI 
PSIASPGAMM AIVMLTDNNR YSFVDQAMTA GVMMAVLLVT LFLLLGANTI QKVIGNVGAA 
IISRVMGLIL AAVALNNLLL GIKDFYVN