Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00154 |
Symbol | aspA |
ID | 5555171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 152672 |
End bp | 154123 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640905650 |
Product | aspartate ammonia-lyase |
Protein accession | YP_001443429 |
Protein GI | 156972522 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACAC TATCTGATGC TCCAAAGACA GCAAACCAAG CCACTCGTAT TGAAGAAGAT CTATTAGGCC AACGTCATGT CCCTGCAGAT GCTTACTACG GCATCCACAC ACTTCGCGCT ATCGAAAACT TCAACATTTC AAGCACTACC ATCTCTGACG TACCTGAATT TGTACGCGGC ATGGTAATGA CTAAGAAAGC CGCAGCACTA GCAAACAAAG AGCTAGGCGC AATTCCAAAA GACGTTGCTA ACTACATCCT AGAAGCGTGT GATTTGATCC TTGAAACAGG TAAGTGCATG GATCAGTTCC CTTCGGACGT ATTCCAAGGC GGTGCTGGCA CGTCAGTGAA CATGAACACT AACGAAGTTA TCGCGAACGT TGCACTTGAA CTGATGGGCA AAGAAAAAGG CCAATATGAG TTCATCAACC CGAACGATCA CGTTAACAAG AGCCAATCAA CAAACTGTGC GTACCCTACG GGCTTCCGTA TCGCGGTTTA CAACAGTGTT CATCAGTTGA TGGAAGCGAT CGAATACCTA AAAGGCGCAT TCGAGCTTAA AGCACAAGAA TTCAAAGACG TGTTGAAGAT GGGTCGTACT CAGCTTCAAG ACGCGGTTCC AATGACTGTA GGTCAAGAGT TCCACGCATG GGCAGTAACG CTAAACGAAG AAATTCGTGC CCTAGACTAC ACGTCTAAGC TACTACTAGA AATCAACCTA GGTGCAACCG CAATCGGTAC TGGTCTAAAC GCCCCAACAG GTTACCAAGC ACTAGCAGTA AAACACCTAG CAGAAGTAAC TGGCGTTGAA GTGGTTGCAG CAGAAGACCT AATCGAAGCA ACGTCTGACT GTGGCGCGTA CGTAATGACA CACGGTGCGC TGAAACGTCT AGCGGTGAAA CTATCGAAGA TCTGTAACGA CCTTCGTCTA CTTTCTTCTG GTCCACGTGC AGGCCTTAAC GAACTGAACC TACCAGAAAT GCAAGCAGGC TCTTCAATCA TGCCAGCTAA AGTAAACCCA GTTATCCCAG AAGTTGTAAA CCAAGTTTGC TTCAAAGTTC TAGGTAACGA CAACACGGTT TCTTTCGCAG CAGAAGGCGG TCAGCTACAG CTTAACGTAA TGGAACCAGT TATCGCACAA AGCGTGTTTG AGTCTATCTC TCTGCTACAC AACGCGTGTG TGAACCTACG TGATAAATGT ATCGATGGCA TCACTGTGAA CAAAGAAGTT TGCGAAAACT ACGTTTACAA CTCTATCGGT ATCGTAACTT ACCTAAACCC ATACATCGGT CACCATGAAG GCGACATTGT TGGTAAGATC TGTGCTGAAA CAGGCAAGAG CGTGCGTGAT GTGGTTCTAG AACGCGGTTT ATTAACTGCT GAAGAGCTAG ATGACATCTT ATCGGTTGAA AACTTCATGC ATCCGACTTA TAAAGCGAAA CGCTACGAGT AA
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Protein sequence | MATLSDAPKT ANQATRIEED LLGQRHVPAD AYYGIHTLRA IENFNISSTT ISDVPEFVRG MVMTKKAAAL ANKELGAIPK DVANYILEAC DLILETGKCM DQFPSDVFQG GAGTSVNMNT NEVIANVALE LMGKEKGQYE FINPNDHVNK SQSTNCAYPT GFRIAVYNSV HQLMEAIEYL KGAFELKAQE FKDVLKMGRT QLQDAVPMTV GQEFHAWAVT LNEEIRALDY TSKLLLEINL GATAIGTGLN APTGYQALAV KHLAEVTGVE VVAAEDLIEA TSDCGAYVMT HGALKRLAVK LSKICNDLRL LSSGPRAGLN ELNLPEMQAG SSIMPAKVNP VIPEVVNQVC FKVLGNDNTV SFAAEGGQLQ LNVMEPVIAQ SVFESISLLH NACVNLRDKC IDGITVNKEV CENYVYNSIG IVTYLNPYIG HHEGDIVGKI CAETGKSVRD VVLERGLLTA EELDDILSVE NFMHPTYKAK RYE
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