Gene VIBHAR_00081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00081 
Symbol 
ID5555654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp81056 
End bp84004 
Gene Length2949 bp 
Protein Length982 aa 
Translation table11 
GC content48% 
IMG OID640905577 
Productnuclease 
Protein accessionYP_001443368 
Protein GI156972461 
COG category[R] General function prediction only 
COG ID[COG2374] Predicted extracellular nuclease 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGT TAATCAAACC CTCTTTACTT GCACTGACGA TTGCCAGCGC GCTTAGTGCC 
AACGCTAACG CAGAAATTAT TCTCTCCCAG TATGTTGAAG GCGGTTCCTA CAACAAGGCG
GTGGAAATCG CGAATACGGG TGATGCAGCG GTAACGCTAA CTGGCTATGA ACTGGCAAAA
TCATCAAACG GTGGCGGTAC TTGGGGCAGC ACACTCGATC TTAGCCAAGT GACGCTACAA
GCGAACCAAG TGTATGTACT GGCGCATGGT GACGCGAGCG ATGCCATCAA AGCTGTCGCG
GATATCACAG ATAAAAGCGT AGCGAACTTT AATGGTGACG ACCCGATCGC GCTGCTTAAA
GATGGTGAAG TGCACGACAT CATCGGTGTG ATGGGGGACG TAGATTTTGG TAAAGACACC
ACATTGGTTC GTAACAGTGA TGCACTAACC CCTTCTGCTA CCTATGATGC ATCTCAGTGG
ACAGCATTTG AGAAAGACAA CATTGACGGT CTTGGTGAGC TAAATGCGAC TGAGCCACCA
GCACCATTCG CTTGTGAAGT CGACGGTCAG CAACCTAACT TCACTACCAT CCAAGATATT
CAAGGTGAAG GCGATACGTC TCCATTCATT GATGGTTACC CATACATCAC TGACGAAGAT
CATTTCGTAA CGGGCGTCGT GACTGCTGTT ACCACTGGCC TAACCAAAGG TTTCTACCTA
CAAGCACTAG AAAGTGACAA CAACGATAAG ACTTCAGAAG GCTTGTTCAT TCATACCGAC
GCGGCAGACA CGGAACTAAA AGCTGGTGAC GTTGTTTGTG TGAAAGGTAA AGTTCAAGAG
TACTACAGTA GTACTCAGCT AGCTTCTGAT GCTAACAGCT ATGTGAAAAC AGGCACATCG
GATATTACTC GAGTTACCGA TCTTGTTATC AAAGAAGGTG AGACACTGCG TGAGGCGCTA
GAGCGTCATG AAGGTATGCA AGTTGAACTA ACCTCGGCAA GTGACTTGTT TGTAACTCGT
AACTTCTCTT ACGACTACGA CTCTCGCCGT AACAACATGA TGTTGTCTCA TGAAGCGCCA
TTGTTTAAGC CGACTCAATT ACACGCAGCA GAGAGCGATG TAGCCGTTGA GCTAGCAAAA
GACAACGCAG CGAACCGCGT ATACCTAGAA TCTGATGGCA AAGCACCAAA CGGCCAAATT
CCTTACTACC CAGATTTTGC TAAAGATGCA GACCAAGATG GCTCTTCTGA ACAGCATATT
CGCCTTGGTT CGCGAGTAGA AGGTCTGCAG GGCGTGGTAG CTTATAGCTA CAACGAGTAC
CGCCTGATTG CGACTAATGA AGTCGATAAC ACTAACTTCG TCACTACAGG TGAAGGTTTC
GACGTGGCTC GTAAAGATGC CCCTGCGATT GCGGATTCAG ATTTGCGTAT CGCTAGCTTC
AACGTCTTGA ACTACTTCAA CTCTGTGGCT GACAGTGGCC ATGAAAACCC AACTGGACAA
AACCGTGGTG CGACTAACCT AGACGAGTTC CTGATCCAAC AAGCGAAAAT CGTTGCGGCA
ATGAACAAGA TGGACGCTGA CATCATTGGT CTGATGGAAG TCGAGAACAA CGGCTTTGGT
GACAGCAGTG CTGTGAAGAA CTTGGTGGAT GCATTGAATG CTGAAATCGA AGACACAGAA
GATCATTACA CTTATGTTGA AATCGCGGAT CAAGACAAAT ACCAAGATGA GTACTTTGGT
AGTGATGCGA TCATGGTGGC GATCCTATAC CGTGCAAACG AAGTGACGCC AAAAGAAGCT
GCGAAAGTGA TTGTGACGCC AGAGCAACAC ATCGAAGAAA ACACCATTAC ACGTGGTGAC
GATGCAGAAG GCAACCCAGC TTACGACAAA TACCAACGTC ATAGCTTGCT ACAAACCTTC
ACGGTGAAAG AGACAGGTAA AGATCTATCT GTTGTTGTTA ACCACTTCAA ATCGAAAGGT
TCTGAATGTA TTGAAGAGTG GATCGCAGGC GTAGAAGACT CTGAGCCAGC GGATCTGCAA
GGTAACTGTA ACAACTTCCG TGTTTCTGCT GCTAACGTTG TGGGTGACGC TCTGAAAGGC
ATTGAAGGTG ATGTGCTAGT AATGGGTGAC CTAAACGCCT ACGGCATGGA AGATCCTCTG
CTTACACTGA CTGATTACTC GAAAGAGAAA TACGGCCGTG ATATCTACAC TGCAGCTTAC
ACAACCATTG GTGGTGGTGA ACTTCAAGTA GAGAAGACCA AAATTGAAAA AGGCTACGGT
TACCACAACC TGAATACCGT GCTGCATGGT GCTGATACTT TCTCATACAC TTACTCTGGT
GAGCTAGGTA ACCTAGACCA CGCATTAGCA AGCAACAGCT TGGCGCAAAA AGTGGTGGCG
ATTGAAGACT GGCACATCAA CTCACTAGAA AGTAACTTGT TTGAATACAG CAGCAAGTAC
ACAGGTGATA TGCCGAAGTA CAAAGATGCA TTCTCAGCGT CTGACCATGA TCCAGTGATC
ATCGCGATTG ATTTCCCAGA TACGGACATC ACACTACCAA GTTCAGGTGA CAACCTGGCT
GTAGAAGTAC GTCTGCCGCC AAACGCAGTG GTGGGTGACA TCGTGACAGT AAGCCTAACG
GAAGCAACTC AAGCAGCGTC GTCAACCTCT GATGCTGATG GTTACGAAGC GAGTACAACT
CTGACACAGG CGGACATTGA TGCTCGTAGC GTGAGTGTGG AGTTCGACAA AGCACCAACA
GAAGGTCAGT ACGTTCTAGA AGAGAAAGTG ACAGACTCTA CGGGTAACAC GGTTAAGTTC
AGCGACTCTC GCGATGTTAC GCTGGAGCCG TCGAGCACGA ACCCATCAGA CGATGATGAT
GGTGGTTCAT TTGGCTTTGG CGCGCTAATT GCGCTGCTAG GTCTAGGCTT ATTCCGTCGT
CGCCGCTAA
 
Protein sequence
MDTLIKPSLL ALTIASALSA NANAEIILSQ YVEGGSYNKA VEIANTGDAA VTLTGYELAK 
SSNGGGTWGS TLDLSQVTLQ ANQVYVLAHG DASDAIKAVA DITDKSVANF NGDDPIALLK
DGEVHDIIGV MGDVDFGKDT TLVRNSDALT PSATYDASQW TAFEKDNIDG LGELNATEPP
APFACEVDGQ QPNFTTIQDI QGEGDTSPFI DGYPYITDED HFVTGVVTAV TTGLTKGFYL
QALESDNNDK TSEGLFIHTD AADTELKAGD VVCVKGKVQE YYSSTQLASD ANSYVKTGTS
DITRVTDLVI KEGETLREAL ERHEGMQVEL TSASDLFVTR NFSYDYDSRR NNMMLSHEAP
LFKPTQLHAA ESDVAVELAK DNAANRVYLE SDGKAPNGQI PYYPDFAKDA DQDGSSEQHI
RLGSRVEGLQ GVVAYSYNEY RLIATNEVDN TNFVTTGEGF DVARKDAPAI ADSDLRIASF
NVLNYFNSVA DSGHENPTGQ NRGATNLDEF LIQQAKIVAA MNKMDADIIG LMEVENNGFG
DSSAVKNLVD ALNAEIEDTE DHYTYVEIAD QDKYQDEYFG SDAIMVAILY RANEVTPKEA
AKVIVTPEQH IEENTITRGD DAEGNPAYDK YQRHSLLQTF TVKETGKDLS VVVNHFKSKG
SECIEEWIAG VEDSEPADLQ GNCNNFRVSA ANVVGDALKG IEGDVLVMGD LNAYGMEDPL
LTLTDYSKEK YGRDIYTAAY TTIGGGELQV EKTKIEKGYG YHNLNTVLHG ADTFSYTYSG
ELGNLDHALA SNSLAQKVVA IEDWHINSLE SNLFEYSSKY TGDMPKYKDA FSASDHDPVI
IAIDFPDTDI TLPSSGDNLA VEVRLPPNAV VGDIVTVSLT EATQAASSTS DADGYEASTT
LTQADIDARS VSVEFDKAPT EGQYVLEEKV TDSTGNTVKF SDSRDVTLEP SSTNPSDDDD
GGSFGFGALI ALLGLGLFRR RR