Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00081 |
Symbol | |
ID | 5555654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 81056 |
End bp | 84004 |
Gene Length | 2949 bp |
Protein Length | 982 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640905577 |
Product | nuclease |
Protein accession | YP_001443368 |
Protein GI | 156972461 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACGT TAATCAAACC CTCTTTACTT GCACTGACGA TTGCCAGCGC GCTTAGTGCC AACGCTAACG CAGAAATTAT TCTCTCCCAG TATGTTGAAG GCGGTTCCTA CAACAAGGCG GTGGAAATCG CGAATACGGG TGATGCAGCG GTAACGCTAA CTGGCTATGA ACTGGCAAAA TCATCAAACG GTGGCGGTAC TTGGGGCAGC ACACTCGATC TTAGCCAAGT GACGCTACAA GCGAACCAAG TGTATGTACT GGCGCATGGT GACGCGAGCG ATGCCATCAA AGCTGTCGCG GATATCACAG ATAAAAGCGT AGCGAACTTT AATGGTGACG ACCCGATCGC GCTGCTTAAA GATGGTGAAG TGCACGACAT CATCGGTGTG ATGGGGGACG TAGATTTTGG TAAAGACACC ACATTGGTTC GTAACAGTGA TGCACTAACC CCTTCTGCTA CCTATGATGC ATCTCAGTGG ACAGCATTTG AGAAAGACAA CATTGACGGT CTTGGTGAGC TAAATGCGAC TGAGCCACCA GCACCATTCG CTTGTGAAGT CGACGGTCAG CAACCTAACT TCACTACCAT CCAAGATATT CAAGGTGAAG GCGATACGTC TCCATTCATT GATGGTTACC CATACATCAC TGACGAAGAT CATTTCGTAA CGGGCGTCGT GACTGCTGTT ACCACTGGCC TAACCAAAGG TTTCTACCTA CAAGCACTAG AAAGTGACAA CAACGATAAG ACTTCAGAAG GCTTGTTCAT TCATACCGAC GCGGCAGACA CGGAACTAAA AGCTGGTGAC GTTGTTTGTG TGAAAGGTAA AGTTCAAGAG TACTACAGTA GTACTCAGCT AGCTTCTGAT GCTAACAGCT ATGTGAAAAC AGGCACATCG GATATTACTC GAGTTACCGA TCTTGTTATC AAAGAAGGTG AGACACTGCG TGAGGCGCTA GAGCGTCATG AAGGTATGCA AGTTGAACTA ACCTCGGCAA GTGACTTGTT TGTAACTCGT AACTTCTCTT ACGACTACGA CTCTCGCCGT AACAACATGA TGTTGTCTCA TGAAGCGCCA TTGTTTAAGC CGACTCAATT ACACGCAGCA GAGAGCGATG TAGCCGTTGA GCTAGCAAAA GACAACGCAG CGAACCGCGT ATACCTAGAA TCTGATGGCA AAGCACCAAA CGGCCAAATT CCTTACTACC CAGATTTTGC TAAAGATGCA GACCAAGATG GCTCTTCTGA ACAGCATATT CGCCTTGGTT CGCGAGTAGA AGGTCTGCAG GGCGTGGTAG CTTATAGCTA CAACGAGTAC CGCCTGATTG CGACTAATGA AGTCGATAAC ACTAACTTCG TCACTACAGG TGAAGGTTTC GACGTGGCTC GTAAAGATGC CCCTGCGATT GCGGATTCAG ATTTGCGTAT CGCTAGCTTC AACGTCTTGA ACTACTTCAA CTCTGTGGCT GACAGTGGCC ATGAAAACCC AACTGGACAA AACCGTGGTG CGACTAACCT AGACGAGTTC CTGATCCAAC AAGCGAAAAT CGTTGCGGCA ATGAACAAGA TGGACGCTGA CATCATTGGT CTGATGGAAG TCGAGAACAA CGGCTTTGGT GACAGCAGTG CTGTGAAGAA CTTGGTGGAT GCATTGAATG CTGAAATCGA AGACACAGAA GATCATTACA CTTATGTTGA AATCGCGGAT CAAGACAAAT ACCAAGATGA GTACTTTGGT AGTGATGCGA TCATGGTGGC GATCCTATAC CGTGCAAACG AAGTGACGCC AAAAGAAGCT GCGAAAGTGA TTGTGACGCC AGAGCAACAC ATCGAAGAAA ACACCATTAC ACGTGGTGAC GATGCAGAAG GCAACCCAGC TTACGACAAA TACCAACGTC ATAGCTTGCT ACAAACCTTC ACGGTGAAAG AGACAGGTAA AGATCTATCT GTTGTTGTTA ACCACTTCAA ATCGAAAGGT TCTGAATGTA TTGAAGAGTG GATCGCAGGC GTAGAAGACT CTGAGCCAGC GGATCTGCAA GGTAACTGTA ACAACTTCCG TGTTTCTGCT GCTAACGTTG TGGGTGACGC TCTGAAAGGC ATTGAAGGTG ATGTGCTAGT AATGGGTGAC CTAAACGCCT ACGGCATGGA AGATCCTCTG CTTACACTGA CTGATTACTC GAAAGAGAAA TACGGCCGTG ATATCTACAC TGCAGCTTAC ACAACCATTG GTGGTGGTGA ACTTCAAGTA GAGAAGACCA AAATTGAAAA AGGCTACGGT TACCACAACC TGAATACCGT GCTGCATGGT GCTGATACTT TCTCATACAC TTACTCTGGT GAGCTAGGTA ACCTAGACCA CGCATTAGCA AGCAACAGCT TGGCGCAAAA AGTGGTGGCG ATTGAAGACT GGCACATCAA CTCACTAGAA AGTAACTTGT TTGAATACAG CAGCAAGTAC ACAGGTGATA TGCCGAAGTA CAAAGATGCA TTCTCAGCGT CTGACCATGA TCCAGTGATC ATCGCGATTG ATTTCCCAGA TACGGACATC ACACTACCAA GTTCAGGTGA CAACCTGGCT GTAGAAGTAC GTCTGCCGCC AAACGCAGTG GTGGGTGACA TCGTGACAGT AAGCCTAACG GAAGCAACTC AAGCAGCGTC GTCAACCTCT GATGCTGATG GTTACGAAGC GAGTACAACT CTGACACAGG CGGACATTGA TGCTCGTAGC GTGAGTGTGG AGTTCGACAA AGCACCAACA GAAGGTCAGT ACGTTCTAGA AGAGAAAGTG ACAGACTCTA CGGGTAACAC GGTTAAGTTC AGCGACTCTC GCGATGTTAC GCTGGAGCCG TCGAGCACGA ACCCATCAGA CGATGATGAT GGTGGTTCAT TTGGCTTTGG CGCGCTAATT GCGCTGCTAG GTCTAGGCTT ATTCCGTCGT CGCCGCTAA
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Protein sequence | MDTLIKPSLL ALTIASALSA NANAEIILSQ YVEGGSYNKA VEIANTGDAA VTLTGYELAK SSNGGGTWGS TLDLSQVTLQ ANQVYVLAHG DASDAIKAVA DITDKSVANF NGDDPIALLK DGEVHDIIGV MGDVDFGKDT TLVRNSDALT PSATYDASQW TAFEKDNIDG LGELNATEPP APFACEVDGQ QPNFTTIQDI QGEGDTSPFI DGYPYITDED HFVTGVVTAV TTGLTKGFYL QALESDNNDK TSEGLFIHTD AADTELKAGD VVCVKGKVQE YYSSTQLASD ANSYVKTGTS DITRVTDLVI KEGETLREAL ERHEGMQVEL TSASDLFVTR NFSYDYDSRR NNMMLSHEAP LFKPTQLHAA ESDVAVELAK DNAANRVYLE SDGKAPNGQI PYYPDFAKDA DQDGSSEQHI RLGSRVEGLQ GVVAYSYNEY RLIATNEVDN TNFVTTGEGF DVARKDAPAI ADSDLRIASF NVLNYFNSVA DSGHENPTGQ NRGATNLDEF LIQQAKIVAA MNKMDADIIG LMEVENNGFG DSSAVKNLVD ALNAEIEDTE DHYTYVEIAD QDKYQDEYFG SDAIMVAILY RANEVTPKEA AKVIVTPEQH IEENTITRGD DAEGNPAYDK YQRHSLLQTF TVKETGKDLS VVVNHFKSKG SECIEEWIAG VEDSEPADLQ GNCNNFRVSA ANVVGDALKG IEGDVLVMGD LNAYGMEDPL LTLTDYSKEK YGRDIYTAAY TTIGGGELQV EKTKIEKGYG YHNLNTVLHG ADTFSYTYSG ELGNLDHALA SNSLAQKVVA IEDWHINSLE SNLFEYSSKY TGDMPKYKDA FSASDHDPVI IAIDFPDTDI TLPSSGDNLA VEVRLPPNAV VGDIVTVSLT EATQAASSTS DADGYEASTT LTQADIDARS VSVEFDKAPT EGQYVLEEKV TDSTGNTVKF SDSRDVTLEP SSTNPSDDDD GGSFGFGALI ALLGLGLFRR RR
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