Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00030 |
Symbol | |
ID | 5556006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 27600 |
End bp | 28115 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640905526 |
Product | fimbrial assembly protein PilP |
Protein accession | YP_001443317 |
Protein GI | 156972410 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3168] Tfp pilus assembly protein PilP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAATA AATCTTTGCT GATGGTTAGT ATGGTGAGTC TGCTGAGTGG TTGCCAAGCC AATGATGAGT CACTAACCGA TTTTATTCGC GGTGTAGAAA ACCAAGCACG CCGTGATGTC GCCAAACTCC AGCCGACTGA AGAATATGTA GTGGTGAGTT ACGAGCCTGA AATTTTGCGT GCCCCTTTTG AACTGCCAAA AGAGGCCACC ATCGCAACTC AACCTGTTGC GAGGCAAGAC TGTTGGCAAC CGCCGTCAAG AAAGCGCACA GGCAAACTGG AACGTTTCCC ACTCAACCAA CTTCGCCTTA AGGGTGTGAT GGGAATGGGC AGCAGCGTCT CGGGTTTGGT TCAAGCACCG AATGGCACAG TTTACAAAGT GAAGCCAGGT CAATACCTCG GACGTAACAA TGGCAAGGTA ACCCACGTAT CCCACAGCTA TTTATTGATT AATGAAACCT TGCCAGACGG TTTAGGTTGT TGGCAAAAGC GCAAAGTGAA GTTGGCGTTG AGATAG
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Protein sequence | MRNKSLLMVS MVSLLSGCQA NDESLTDFIR GVENQARRDV AKLQPTEEYV VVSYEPEILR APFELPKEAT IATQPVARQD CWQPPSRKRT GKLERFPLNQ LRLKGVMGMG SSVSGLVQAP NGTVYKVKPG QYLGRNNGKV THVSHSYLLI NETLPDGLGC WQKRKVKLAL R
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