| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004514 |
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| Symbol | |
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| ID | 8558282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3237258 |
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| End bp | 3238625 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407643 |
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| Product | outer membrane stress sensor protease DegQ |
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| Protein accession | YP_003287137 |
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| Protein GI | 262395283 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00186375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC CACTGCTTGC GCTCACCGTT CTATCTCTGA GTTTGGGCTC TATTATTGCG
CCAGTTCAAG CCACCGCCGC ATTACCTTTA AATGTGGATG GCCAACAGTT ACCTAGCTTG
GCGCCCATGC TTGAGAAAGT AACCCCTGCT GTTGTGAGTA TTGCTGTAGA AGGCAAACAA
GTACAAACCA GCCGTATTCC CGAACAATTT CAATTCTTCT TTGGACCGGA CTTTCCGATG
GAGCAAAGGC GTGAGCGCCC GTTCAGAGGT TTAGGTTCTG GTGTCATTAT TGATGCGAAA
AAAGGGCATA TCGTCACTAA CTACCACGTA ATCAAGGGCG CGGATGAGAT TCGAGTTCGC
CTCTATGATG GTCGCGAGTA TGACGCTACG CTCGTTGGCG GAGATGAGAT GGCCGATGTT
GCGTTGCTTA AATTAGAAAA AGCGAAAAAC TTAACGCAAA TTAAAGTCGC AGATTCCGAC
AAACTTCGCG TAGGTGACTT TACGGTTGCG ATTGGTAACC CATTTGGACT CGGTCAAACC
GTGACGTCGG GCATCGTCTC AGCGTTAGGC CGTAGTGGCT TAAACGTTGA AAACTTCGAA
AACTTCATCC AAACCGATGC CGCAATTAAC AGCGGTAACT CTGGTGGTGC ATTGGTCAAC
CTTAATGGTG AGCTGATCGG TATTAATACT GCGATTTTAG GCCCTAACGG CGGTAACGTG
GGGATTGGCT TTGCGATTCC ATCAAACATG ATGAAAAACC TCACCGAGCA AATTCTAGAG
TTTGGTGAAG TCAAACGCGG CATGTTGGGT GTGCAAGGTG GCGAAGTAAC CTCTGAGCTA
GCTGATGCAC TGGGTTACGA GTCGAGTAAA GGGGCCTTTA TTGGTCAAGT CGTACCGGAC
AGCGCAGCCG ATAAAGCTGG ATTGAAAGCC GGTGATGTAA TTGTATCGGT AAACGGCAAA
GCGATTAATA CTTTCTCAGA GCTCCGCGCA AAAGTGGCAA CGCTGGGCGC AGGTAAAGAA
ATCACATTAG GTGTGGTTCG AGATGGTAAG AACAAAACCT TTGATGTAAC GCTTGGCGAA
TCTACAAATA TGAAAGCCAA AGCCGAAACA TTACACGAAG GGCTCAAGGG TGCGGAATTA
AGCAATACGA CACCAAGTGA TGCGATTCAA GGCGTTAAAG TATCAAGCGT TGCAGATAAC
TCTCCGGCTG CTCAATATCA ATTACAACAA GGTGACATCA TTATCGGTGT GAACCGTCAG
CGCGTGAAAA ACCTTGCTGA GCTTCGTGCA ATCGTGGATA AACACAAAGG CGTATTGGCT
CTGAATATTC AGCGTGGCGA ACGTACTATT TATCTTGTTA TTCGTTAG
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| Protein sequence | MKKPLLALTV LSLSLGSIIA PVQATAALPL NVDGQQLPSL APMLEKVTPA VVSIAVEGKQ
VQTSRIPEQF QFFFGPDFPM EQRRERPFRG LGSGVIIDAK KGHIVTNYHV IKGADEIRVR
LYDGREYDAT LVGGDEMADV ALLKLEKAKN LTQIKVADSD KLRVGDFTVA IGNPFGLGQT
VTSGIVSALG RSGLNVENFE NFIQTDAAIN SGNSGGALVN LNGELIGINT AILGPNGGNV
GIGFAIPSNM MKNLTEQILE FGEVKRGMLG VQGGEVTSEL ADALGYESSK GAFIGQVVPD
SAADKAGLKA GDVIVSVNGK AINTFSELRA KVATLGAGKE ITLGVVRDGK NKTFDVTLGE
STNMKAKAET LHEGLKGAEL SNTTPSDAIQ GVKVSSVADN SPAAQYQLQQ GDIIIGVNRQ
RVKNLAELRA IVDKHKGVLA LNIQRGERTI YLVIR
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