Gene VEA_004504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004504 
Symbol 
ID8558272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp3229046 
End bp3229711 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content44% 
IMG OID646407633 
Productputative hemolysin 
Protein accessionYP_003287127 
Protein GI262395273 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000407403 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTA GCTTTGTTAT CTTATTAACA GCATTGAGTT TAAGTGGTTG TGCTGGCTTG 
TTTATCGCTG GCGCTGCAAC CACAGCAAAT ATTGTCACGG ACACACGCAG TACAAAACAA 
ATTTGGCAGG ACAACAACAT CGAATTCGAA GTTGCAGCGA TCGGTAACAA GGCGCCGTTT 
AAAGGTGAAG TTCGTGTGGT TGCCAGCTCT TATAACGGTA CGGTTGTTCT TATGGGTCAG 
GCTCCAACGC AAGACCTTAT CCATGCTTTG GAGCGAAGAG CTCGAGAAGT TAGTGGTGTG 
AAAGTCATAC ACAATCAAAT CAAACAAAAA GAGCCACTCA CTGTCACTCA AATTAGCAAC 
GACAGTTGGA TCACAACCAA AGTAAAATCA GCCTTGCTGA CCGACTCTGA ACTCAATGGC 
GTTAAGGTTA AAGTGATCAC TGAAGACGGC GACGTTTTTC TGTTTGGTTA TGTCACACCA 
GAGCAAGGCG AGCGAGCGAC AGAAATCGCG CGTAATATCT CTGGCGTAAA ACAAGTCATT 
AAAGGGTTCC AATATGGCGA AATGGAACCT GTTGAAGTGG ACTTACCGAG TGACGGTGTA 
CAAACAATAG AAAGTGAGAC AAACGCGGAA AATGAAGCCA ACGTCGAAGC ATTTACGATT 
GAGTAA
 
Protein sequence
MIRSFVILLT ALSLSGCAGL FIAGAATTAN IVTDTRSTKQ IWQDNNIEFE VAAIGNKAPF 
KGEVRVVASS YNGTVVLMGQ APTQDLIHAL ERRAREVSGV KVIHNQIKQK EPLTVTQISN 
DSWITTKVKS ALLTDSELNG VKVKVITEDG DVFLFGYVTP EQGERATEIA RNISGVKQVI 
KGFQYGEMEP VEVDLPSDGV QTIESETNAE NEANVEAFTI E