Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004489 |
Symbol | |
ID | 8558257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3212355 |
End bp | 3213812 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407618 |
Product | UDP-N-acetylmuramate--alanine ligase |
Protein accession | YP_003287112 |
Protein GI | 262395258 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0276736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATCC AACATACACA AGACTTAGCT CAGATTCGCG CCATGGTGCC AGAGATGCGC CGCGTGAAAT CCATCCACTT CATCGGTATT GGTGGTGCGG GCATGAGCGG CATTGCAGAA GTGCTGTTGA ATGAAGGCTA TCAAATCACG GGTTCTGACC TATCAGAAAA CCCTGTGACA GAGCGTTTAG TATCAAAAGG TGCGACGGTA TTTATCGGGC ACCAAGCTAG CAATGTTGAA AAAGCCAGTG TGGTTGTGGT TTCAACCGCT ATCAACGAAG AAAACCCAGA AGTGATAGCT GCACGGGAGT TACGTATCCC TATTGTACGT CGTGCTGAGA TGCTCGCTGA GTTGATGCGC TTCCGTCATG GTATTGCCGT TGCGGGCACG CACGGTAAAA CGACGACGAC GGCACTCGTG ACACAAATTT ATTCTGAAGC AGGTCTTGAT CCAACGTTTG TAAACGGCGG CTTGGTGAAA AGCGCAGGTA CAAATGCTCG TTTAGGCTCG AGTCGTATTC TAATTGCTGA GGCGGATGAG AGCGACGCGT CATTCCTGCA CCTGCAACCA ATGGTAAGTA TCGTCACCAA TATTGAAGCC GATCATATGG ATACTTATGG TGGTGACTTT GAAACGTTAA AGCAAACCTT CATTGATTTT CTACACAATC TACCGTTCTA CGGCCAAGCT ATTGTTTGTA TTGATGATCC TGTGGTTCGA GAGTTAATCC CACGTATTAG TCGTCAAGTG ATTACTTACG GTTTCTCCGA AGATGCTGAC GTACGCATTG AAAACTATCG TCAAGAAGGT CAGCAAGGCA AATTTACGGT AGTACGTAAA GGGCGTGCCA ACCTAGATAT CACTCTGAAC ATTCCAGGTC GTCACAATGC ACTTAATGCG TCGGCTGCGA TTGCAGTGGC TACTGAAGAT GACATTGAAG ACGATGCAAT TCTAAAAGCA ATGGCCGGTA CGCAAGGCAC GGGACGACGT TTTGATCACC TTGGCGAGTT TGATACTGGT AATGGTCATG CCATGTTAGT GGATGATTAC GGACACCACC CAACAGAAGT TGATGTGACC ATTAATGCTG CGCGAAGCGG TTGGCAAGAT AAACGTCTCG TTATGATTTT CCAACCACAC CGTTATAGCC GTACTCGTGA TCTGTACGAT GACTTTGCGA ATGTGCTAGA GCAAGTTGAT GTATTAATCA TGTTGGATGT ATATGCCGCA GGTGAAAAGC CAATTGCAGG AGCTGATGGA CGTTCATTGT GTCGCACAAT TCGCAGCCGA GGTAAGGTAG ATCCGATTTT TGTTCCAGAA ATCGAGCAAT TACCTTCAGT TTTAGCTAAC GTTATACAAG ACGGCGACCT AATCTTAACG CAAGGCGCGG GTGATGTTGG TAAAGTGGCG AAACAACTGG CAGGTCTTGA ATTAAATATA AACAAGATGC TTGGTTAA
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Protein sequence | MTIQHTQDLA QIRAMVPEMR RVKSIHFIGI GGAGMSGIAE VLLNEGYQIT GSDLSENPVT ERLVSKGATV FIGHQASNVE KASVVVVSTA INEENPEVIA ARELRIPIVR RAEMLAELMR FRHGIAVAGT HGKTTTTALV TQIYSEAGLD PTFVNGGLVK SAGTNARLGS SRILIAEADE SDASFLHLQP MVSIVTNIEA DHMDTYGGDF ETLKQTFIDF LHNLPFYGQA IVCIDDPVVR ELIPRISRQV ITYGFSEDAD VRIENYRQEG QQGKFTVVRK GRANLDITLN IPGRHNALNA SAAIAVATED DIEDDAILKA MAGTQGTGRR FDHLGEFDTG NGHAMLVDDY GHHPTEVDVT INAARSGWQD KRLVMIFQPH RYSRTRDLYD DFANVLEQVD VLIMLDVYAA GEKPIAGADG RSLCRTIRSR GKVDPIFVPE IEQLPSVLAN VIQDGDLILT QGAGDVGKVA KQLAGLELNI NKMLG
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