| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004467 |
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| Symbol | |
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| ID | 8558235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3182840 |
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| End bp | 3184309 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407596 |
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| Product | glutamate synthase [NADPH] small chain |
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| Protein accession | YP_003287090 |
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| Protein GI | 262395236 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGC CTACTGGATT TTTAGAGCAT GGTCGTGAAC TACCACAGAA GATCGACCCA
GCTGAACGCA TCAAGAACAA CAAAGAGTTC GTTCTGAACG AGGAGTTTGG TGACAAGATC
AATACTCAAG CGTCTCGTTG TATGGATTGT GGTGTGCCGT TTTGTCATAA CGGCTGCCCT
ATCGGTAACA TCATCCCAGA GTTTAACGAT GCGGTTTATC GTGATAGCTG GGAAGAAGCA
TGGAACATTC TAAGCTCAAC CAATAACTTC CCAGAGTTTA CTGGTCGTGT TTGCCCTGCT
CCATGTGAAA GTGCTTGTGT ACTTGGCATC AACCAAGACC CAATCACCAT CTGTAACATC
GAGAAAACCA TCGTAGAAAC GGCGTATCGT GAAGGGTACG CCAAGCCAAA AACGCCACGT
TCTCGCACTG GTAAAACGAT AGCGATCATT GGATCTGGAC CAGCGGGTCT TGCGGCTGCT
GAGCAGCTAA ACAGCGCTGG TCATACTGTG ACAGTATTCG AGCGAGACGA GAAGGTTGGT
GGTCTGCTGC GTTTCGGTAT TCCAGATTTT AAACTGAGCA TGGAAGTCAT TGATCGTAAG
ATCAATCTAA TGGCAGAAGC TGGCGTTGAG TTTAAAGTAA ACCAACACGT CGGTGTTGAT
GTAAATGCTC AGCAACTGCG TCAAGAGTTC GATGTGGTTC TACTGACGGG TGGCTCAACG
GTTCCACGTG ATTTGCCAGT TCCGGGTCGT GAGCTCAAAG GCGTTCACTT CGCAATGGAA
TTCCTAGGTC AAAACAACCG ACGTGCAAAT AACATGGACC TGAAAACGGA AGAGATTCAC
GCAAAAGGTA AACATGTGGT TGTCATTGGT GGTGGTGATA CCGGTTCAGA CTGTGTAGGT
ACGTCAAACC GTCACGGCGC AGCAAGCGTA ACTCAAGTGG AAATCATGCC GATTCCACCA
GAGAAGCGCC CAGCCAATAT GCCTTGGCCT CAATACCCAA TGATCCTACG TACTTCGACC
TCTCATGAAG AAGGTGTCGA TCGTCACTGG AACATCCTGA CCAAAGAGTT CATCGGAAAT
GACAAAGGTG AAGTCACAGG CCTTCGTCTT GCTGATATCG TTTGGCAAGA TGCAAAACCA
GGCGAGCGCC CAAGTTTCAA AGAAGTAGAA GGCAGCGAGC GAGTGATCCC ATGTGATATG
GCATTCCTAG CAATGGGCTT CTTACACCCA GAACCTACAG GCGTGCTTGC TCAACTGGAT
ATCGCGCTAG ATGATCGCGG TAACGTAGCA ACTCAAGGTT TTGCTACTAA CCAAGAAGGC
GTATTTGCTG CTGGTGATAT GCGAACAGGC CAATCTTTGG TGGTTCGTTG TATCAACGAA
GGTCGCGAAT GTGCTCGTGC TATCGATGAC TACCTAATGG ATGGCACAAA CCTAGAAGCA
AAAGCAGATT CACTGATGCT TTCTGCTTAA
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| Protein sequence | MGKPTGFLEH GRELPQKIDP AERIKNNKEF VLNEEFGDKI NTQASRCMDC GVPFCHNGCP
IGNIIPEFND AVYRDSWEEA WNILSSTNNF PEFTGRVCPA PCESACVLGI NQDPITICNI
EKTIVETAYR EGYAKPKTPR SRTGKTIAII GSGPAGLAAA EQLNSAGHTV TVFERDEKVG
GLLRFGIPDF KLSMEVIDRK INLMAEAGVE FKVNQHVGVD VNAQQLRQEF DVVLLTGGST
VPRDLPVPGR ELKGVHFAME FLGQNNRRAN NMDLKTEEIH AKGKHVVVIG GGDTGSDCVG
TSNRHGAASV TQVEIMPIPP EKRPANMPWP QYPMILRTST SHEEGVDRHW NILTKEFIGN
DKGEVTGLRL ADIVWQDAKP GERPSFKEVE GSERVIPCDM AFLAMGFLHP EPTGVLAQLD
IALDDRGNVA TQGFATNQEG VFAAGDMRTG QSLVVRCINE GRECARAIDD YLMDGTNLEA
KADSLMLSA
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