Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004450 |
Symbol | |
ID | 8558218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3160625 |
End bp | 3161305 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407579 |
Product | uracil-DNA glycosylase |
Protein accession | YP_003287073 |
Protein GI | 262395219 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0252327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCAGT CACCCACTTG GCACGATGTG ATCGGCGAAG AGAAAAAACA GAGCTACTTT GTAGACACTT TGAATTTTGT AGAAGCAGAA CGCGCCGCAG GCAAAGCGAT TTTCCCGCCA GCGAAAGATG TCTTTAATGC GTTTCGTTTT ACCGAGTTTA ACGATGTTAA AGTAGTGATT CTGGGACAAG ACCCATACCA TGGTCCAAAT CAGGCGCATG GTTTGTGCTT TTCCGTGCTT CCTGGAATCA AAACGCCACC ATCACTCGTT AATATGTATA AAGAGCTGGC TCAAGATATT GAAGGGTTCC AGATCCCTCA GCATGGATTC TTACAAAGTT GGGCTGAGCA AGGTGTATTG TTGCTCAATA CGGTATTGAC GGTTGAGCAA GGTAAAGCGC ATTCACATTC AAAAACGGGG TGGGAAACGT TCACTGACCG AGTGATTGAA GCGATAAACC AGCATCAGGA AGGCGTGGTG TTTTTATTGT GGGGCTCTCA CGCTCAGAAG AAAGGGCGCT TTATTGATCG CAATAAACAT CATGTGTTAG CCGCACCACA TCCATCACCA CTCTCAGCAC ACCGAGGTTT TTTTGGTTGT AAGCATTTCT CTCAAGCAAA CCAGTTACTT GCCTCGCAAG GAAAAGCACC AATCAACTGG CATTTGCCAT TAACTGTATA A
|
Protein sequence | MNQSPTWHDV IGEEKKQSYF VDTLNFVEAE RAAGKAIFPP AKDVFNAFRF TEFNDVKVVI LGQDPYHGPN QAHGLCFSVL PGIKTPPSLV NMYKELAQDI EGFQIPQHGF LQSWAEQGVL LLNTVLTVEQ GKAHSHSKTG WETFTDRVIE AINQHQEGVV FLLWGSHAQK KGRFIDRNKH HVLAAPHPSP LSAHRGFFGC KHFSQANQLL ASQGKAPINW HLPLTV
|
| |