| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004439 |
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| Symbol | |
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| ID | 8558207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3148385 |
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| End bp | 3150124 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407568 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_003287062 |
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| Protein GI | 262395208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA TTCAACGACG TCCTGAACCT GATCTTTCCC TTCTTCCTGA TTCCATTCCT
CCGATTCTCA AACGTATCTA CATCAACCGT GGGATTACGG ATCCTGCGCA ACTAGAAACG
TCAGCTCGTG GTTTGCATTC TTACCAAAAA CTCGGGGGGA TTGAGCAAGC TGTCGAGCTT
TTGTTTCAGG CAATAAAAGA ACAAAAACGC ATCATCGTTG TCGGTGATTT TGACGCTGAT
GGTGCGACGA GCTCTGCATT GTCGGTGCTC GCGCTGCGTA TGCTTGGTAG TCACAATGTG
GACTACCTAG TACCGAATCG TTTTGAAGAC GGTTATGGGT TAAGCCCAGA AGTCGTTGAC
CAAGCATTAG AGCTTGGCGC TGAGATGATC ATGACGGTAG ATAACGGTGT GTCATCAATC
GAAGGCGTGC GTTACGCAAA AGAAAACGGC ATTACCGTGC TCGTTACCGA TCACCACTTA
CCGGGACAAG TGTTGCCTGA TGTGGATGCA ATGGTGAACC CAAACCTTGA GAGCTGTCAC
TTTCCGTCTA AAGCGCTCGC TGGTGTCGGG GTCGCGTTTT ATCTCATGAT GGCACTATGC
GTTCATATGC GAAAACACAA TTGGTTTGCT GAGCAGGGCA TGCAAGAGCC TAAGTTGATG
GAACTGATTG ACCTTGTTGC ACTTGGCACT GTAGCTGACG TTGTCCCACT GGATGAAAAC
AACCGTATTC TTGTGCACCA AGGCCTGCAG CGTATTCGTG CGGGCAAAGC GCGCCCTGGC
ATTCAAGCAT TGATTGAAGT AGCGAAGCGC GATGCGCGTC GTTTGGTGGC GTCCGATTTT
GGTTTTGCTT TAGGTCCTCG TATCAATGCT GCAGGTCGCC TTGATGATAT GTCATTTGGT
GTTGAACTGT TGATGTGTAA CAACATTCAC GCCGCTCGTC GTATGGCAAG TGAACTGGAT
GGTTTGAACC AAACTCGTAA AGAGATTGAA GAAGGCATGA AGCAAGAAGC GATGGCTTTC
TGCGAGCGTC TCCAGTTTGG TGAAGGCAGT GAGCTTCCTT ACGGATTAGC CTTGTTCCAA
CGTGATTGGC ACCAAGGTGT GATTGGTATT TTGGCCTCGC GCATCAAAGA GAAGTTTCAC
CGTCCAGTCA TCGCATTTGC TGATGGCGGA GAAGGGACAA TTAAGGGTTC GTGTCGTTCA
ATTCCAGGGT TACACATGCG CGATGCGTTG GATTTCATCG ACACGCAAAA CCCAGGTTTG
ATCATCAAAT TTGGTGGTCA CGCGATGGCG GCAGGCTTAA CAATTAAAGA GCAGGATTTT
GAACGTTTCA GCCGTTTATT TGATGAAGTG GTAAAAAAAG AACTCGATGA AGCGGCGCTA
AAAGGCGTGA TCATGTCAGA TGGTGAACTT AAGCCTGAAG AATTCTCTAT GCATGTCGCT
GAACAGCTAC GGTCTGGTGG CCCTTTTGGA CAAGCCTTTC CTGAACCAAT CTTTGATGGT
GAGTTTAAAG TGTTGCACCA AAAGCTGGTG GGTGAGAAGC ATCTTAAATT AATGTTAGAG
CCGCTTTACA AAGGTCATCC TACCAATGTG ATGATCGATG GCATTGCATT TAATGTCGAT
TTGCGTCGCT GGCCGGATGC ATCAGTTAAA ACGGTACGTT TAGCTTACAA ATTGGATGTG
AATGAATTTC GTGGGAATCA ATCACTGCAA TTGATGATCG ATCATATCGA AGCTAAGTAA
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| Protein sequence | MIEIQRRPEP DLSLLPDSIP PILKRIYINR GITDPAQLET SARGLHSYQK LGGIEQAVEL
LFQAIKEQKR IIVVGDFDAD GATSSALSVL ALRMLGSHNV DYLVPNRFED GYGLSPEVVD
QALELGAEMI MTVDNGVSSI EGVRYAKENG ITVLVTDHHL PGQVLPDVDA MVNPNLESCH
FPSKALAGVG VAFYLMMALC VHMRKHNWFA EQGMQEPKLM ELIDLVALGT VADVVPLDEN
NRILVHQGLQ RIRAGKARPG IQALIEVAKR DARRLVASDF GFALGPRINA AGRLDDMSFG
VELLMCNNIH AARRMASELD GLNQTRKEIE EGMKQEAMAF CERLQFGEGS ELPYGLALFQ
RDWHQGVIGI LASRIKEKFH RPVIAFADGG EGTIKGSCRS IPGLHMRDAL DFIDTQNPGL
IIKFGGHAMA AGLTIKEQDF ERFSRLFDEV VKKELDEAAL KGVIMSDGEL KPEEFSMHVA
EQLRSGGPFG QAFPEPIFDG EFKVLHQKLV GEKHLKLMLE PLYKGHPTNV MIDGIAFNVD
LRRWPDASVK TVRLAYKLDV NEFRGNQSLQ LMIDHIEAK
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