Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004372 |
Symbol | |
ID | 8558133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3065812 |
End bp | 3067440 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407494 |
Product | malate synthase |
Protein accession | YP_003286995 |
Protein GI | 262395141 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGCTC AGACAGAACA AAAAACACAA CAACTAAAGC AAACCCAAGG CATGCTTGAG GTGAATGGAG TCGTTGCTCC AGAACATCAA GCAATTTTCC CTGTTGAAGC CCAAACCTTT TTATCTCTAC TGTGTGAAAA ATTTGCCGGA CGTGTTGAGC AGTTGCTGGA AGCACGAGAA GAGAAGCAAG CGCGTATCGA TGCAGGTGAG CTGCCAGACT TTTTACCAGA GACACAAGAC ATCCGTGAAG GAAGCTGGAA GATCCTGGGA ATCCCACAAG ATCTGCAAGA TCGCCGTGTG GAGATTACCG GACCAACTGA TCGCAAGATG GTGATTAACG CACTGAATGC GAATGTAAAA GTGTTTATGG CAGACTTCGA AGATTCAATG TCTCCAGCAT GGAGTAAAGT GCTGGATGGG CAAGTGAATT TACGCGATGC CGTGAATGGC ACCATCAGTT ACATCAACCC TGGCAATGGC AAGCATTATC AGCTGGAAGA TGACCCAGCG GTGTTGATCT GCCGTGTTCG CGGCCTTCAT TTAAAAGAAA AACACGTTAC GTGGCACGGT CAGATCATTC CAGGTGCGCT ATTCGATTTC GCTCTGTACT TCTATAACAA CTACAAAGCG TTACTTCAAA AAGGCAGCGG CCCTTATTTC TACATTCCAA AACTGCAATC GCATCACGAA GCGAAGTGGT GGAGCGAAGT GTTCCATTTC ACGGAAGACT ATTTCGGTCT TGATACAGGC ACCATCAAAG CGACAGTGCT GATTGAAACC TTACCAGCCG TATTCGAAAT GGATGAGATT CTGTTCTCAC TTAAAGAACA CATCGTTGGT TTGAACTGTG GTCGCTGGGA TTACATCTTT AGCTACATCA AAACCTTGAA GAAGCACCCT GAACGCGTAC TGCCAGATCG CCAAGTGGTT ACGATGGATA AGCCATTCTT GAACGCTTAC TCGCGATTAT TGGTGCGTAC TTGTCATAAA CGAGGTGCTT TCGCGATGGG AGGAATGGCC GCCTTTATCC CAGCGAAAAA CCCGCAAGAG AATCAAAAAG TATTAGACAA GATCCAGACT GACAAATCGC TAGAAGCAAA CAACGGTCAC GACGGTACTT GGGTAGCTCA TCCAGGTTTG GCTGACACCG CGATGGAAGT TTTTAGTGCT GTACTGGGCG AGCGCACCAA TCAATTGGAT GTGAGTCGTT CAGAGGATGC ACCTATTACA GCGGCTGAAC TACTTGAGCC TTGTGAAGGC GAGCGTACAG AAGCCGGAAT GCGCCACAAT ATTCGTGTTG CGCTGCAATA CATCGAAGCT TGGATTTCTG GTAATGGTTG TGTACCAATT TATGGCTTGA TGGAAGATGC GGCGACAGCT GAAATCTCTC GCGCTTCTAT CTGGCAATGG ATTCAACACG GCAAGTCGCT AGATAACGGA TTGAAGGTCA CTAAGGATCT GTTCGAGCTC TATCTAAAAG AAGAGATTGA AGTCGTGAAA CAAGAAATTG GTGAGCAGCG CTACCAAGCG GGTCGATTTG AAGAAGCGGC AGACTTGATG GCAAGACTCA CCACAAGCGA TGAGCTGACC AACTTTTTAA CAGTTCCTGG TTATGACTAC CTGGATTAA
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Protein sequence | MLAQTEQKTQ QLKQTQGMLE VNGVVAPEHQ AIFPVEAQTF LSLLCEKFAG RVEQLLEARE EKQARIDAGE LPDFLPETQD IREGSWKILG IPQDLQDRRV EITGPTDRKM VINALNANVK VFMADFEDSM SPAWSKVLDG QVNLRDAVNG TISYINPGNG KHYQLEDDPA VLICRVRGLH LKEKHVTWHG QIIPGALFDF ALYFYNNYKA LLQKGSGPYF YIPKLQSHHE AKWWSEVFHF TEDYFGLDTG TIKATVLIET LPAVFEMDEI LFSLKEHIVG LNCGRWDYIF SYIKTLKKHP ERVLPDRQVV TMDKPFLNAY SRLLVRTCHK RGAFAMGGMA AFIPAKNPQE NQKVLDKIQT DKSLEANNGH DGTWVAHPGL ADTAMEVFSA VLGERTNQLD VSRSEDAPIT AAELLEPCEG ERTEAGMRHN IRVALQYIEA WISGNGCVPI YGLMEDAATA EISRASIWQW IQHGKSLDNG LKVTKDLFEL YLKEEIEVVK QEIGEQRYQA GRFEEAADLM ARLTTSDELT NFLTVPGYDY LD
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