| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004362 |
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| Symbol | |
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| ID | 8558123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 3054392 |
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| End bp | 3055111 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407484 |
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| Product | tRNA:Cm32/Um32 methyltransferase |
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| Protein accession | YP_003286985 |
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| Protein GI | 262395131 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00237949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGATC AAGTAAAAAT TGTACTCGTA GGTACCTCTC ATTCAGGCAA TATTGGCTCA
GCAGCTCGAG CTATGAAAGT GATGGGTTTA AGCCAACTAG TATTAGTCGA TCCACAATGT
GAAGTGGACG AACAAACTCT TGCTTTGGCT GCGGGTGCTG GTGATATTGC TCAAAATGCA
AAGATTGTCG GCACATTAGA AGAAGCGGTT GAAGATTGCA GTCTCGTGGT GGGCTCCAGT
GCTCGCTCTC GTACATTAGA ATGGCCAATG CTTGAGCCAC GTGAATGTGG TGAGAAATTT
GCGGTTGAGG GTAGAAAACA CCCTGTCGCG CTCGTGTTTG GTCGTGAAAG AACTGGTCTA
ACAAATGAAG AGCTGCAAAG GTGTCACTAC CATGTTTGCA TTCCTGCTAA CCCTGAATAT
AGCTCGCTTA ACCTAGCGAT GGCCGTACAA ACTCTGAGTT ACGAAGTACG AGTTGCGCAT
TTGAACTTAG AGCAAAGCCA GTTTGCCCCA AATGAGCCGG AAGAGTACCC ACGTCATAGA
GAGCTCGAAA TGTTCTTCGA GCATCTTGAA AAGGTGATGG TTGAGACCCA GTTTATCAAT
AAAGAGCAAC CAGGACAGGT GATGAATAAA TTGCGTCGCT TGTTCTCTCG TGCTCGGCCA
GAAACCCAGG AGCTCAATAT TCTACGCGGC ATTTTAACCT CGATAGAAAA GAAGTTCTGA
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| Protein sequence | MLDQVKIVLV GTSHSGNIGS AARAMKVMGL SQLVLVDPQC EVDEQTLALA AGAGDIAQNA
KIVGTLEEAV EDCSLVVGSS ARSRTLEWPM LEPRECGEKF AVEGRKHPVA LVFGRERTGL
TNEELQRCHY HVCIPANPEY SSLNLAMAVQ TLSYEVRVAH LNLEQSQFAP NEPEEYPRHR
ELEMFFEHLE KVMVETQFIN KEQPGQVMNK LRRLFSRARP ETQELNILRG ILTSIEKKF
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