Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004360 |
Symbol | |
ID | 8558121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 3052517 |
End bp | 3053731 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646407482 |
Product | cysteine desulfurase |
Protein accession | YP_003286983 |
Protein GI | 262395129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.591204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGC CGATTTATCT TGATTATTCC GCTACATGTC CAGTTGATCC ACGTGTTGCT GAAAAAATGG TTCAGTACAT GACAATGGAT GGCACATTTG GCAACCCAGC GTCGCGTTCG CACCGTTACG GCTGGCAGGC AGAAGAAGCG GTCGATACTG CTCGTGAGCA AATTGCTGAC CTTCTAAATG CAGATCCTCG CGAAATCGTA TTTACATCTG GTGCGACAGA ATCAGACAAC CTTGCTATTA AAGGTGCAGC GCACTTTTAC TCGAAGAAAG GCAAGCACGT AATCACTTGT AAAACAGAGC ACAAAGCCGT TCTTGACCCA TGTCGTCAAC TTGAGCGTGA AGGCTTTGAA GTGACTTACC TTGAGCCAGA ATCAAATGGC TTGATCGATC TAGAGAAGCT TAAAGCGGCA ATGCGTGATG ACACAGTGCT TGTGTCTATT ATGCACGTAA ACAACGAGAT TGGTGTGGTT CAAGACATTA CAGCGATCGG CGAATTGTGT CGTGAGCGTA AAATTGTTTT CCACGTGGAT GCAGCGCAAT CTGCAGGTAA ATTACCAATC GACGTTCAAG AGATGAAAGT TGACCTAATT TCGCTTTCTG CTCACAAAGT TTATGGCCCT AAAGGCATCG GTGCACTTTA CGTTCGTCGT AAGCCTCGTA TTCGTCTTGA AGCGCAAATG CACGGTGGCG GCCATGAGCG TGGTTTCCGC TCTGGTACAC TTCCTACCCA CCAAGTCGTT GGTATGGGTG AAGCATTCCG CATTGCAAAA GAAGACATGC AAAAAGATTA CGATCACGCT TTAGCGCTTC GTAACCGTCT TTTTGATGGC GTGAAAGACT TAGAAGCAGT GACGGTAAAC GGTGACCTTG AGCAACGTGT ACCACACAAC CTAAACATCA GCTTCGCATT CGTAGAAGGT GAATCACTAC TAATGTCGCT TAAAGATCTA GCGGTATCTT CTGGTAGTGC TTGTACGTCT GCAAGTCTTG AGCCTTCTTA CGTTCTTCGT GCCCTAGGCA TGGATGATGA ATTGGCTCAC AGCTCGGTTC GTTTCTCGTT TGGTCGTTTC ACGACTGAAG AAGAAATTGA TTACGCAATT GAACAAATCC GCGTTGCAGT GACTAAGCTA CGCGACATGT CTCCTCTATG GGATATGTAC AAAGAAGGGA TTGATTTGAG CACTGTTGAA TGGGCTCACC ATTAA
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Protein sequence | MKLPIYLDYS ATCPVDPRVA EKMVQYMTMD GTFGNPASRS HRYGWQAEEA VDTAREQIAD LLNADPREIV FTSGATESDN LAIKGAAHFY SKKGKHVITC KTEHKAVLDP CRQLEREGFE VTYLEPESNG LIDLEKLKAA MRDDTVLVSI MHVNNEIGVV QDITAIGELC RERKIVFHVD AAQSAGKLPI DVQEMKVDLI SLSAHKVYGP KGIGALYVRR KPRIRLEAQM HGGGHERGFR SGTLPTHQVV GMGEAFRIAK EDMQKDYDHA LALRNRLFDG VKDLEAVTVN GDLEQRVPHN LNISFAFVEG ESLLMSLKDL AVSSGSACTS ASLEPSYVLR ALGMDDELAH SSVRFSFGRF TTEEEIDYAI EQIRVAVTKL RDMSPLWDMY KEGIDLSTVE WAHH
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